X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FSequenceAnnotationReport.java;fp=src%2Fjalview%2Fio%2FSequenceAnnotationReport.java;h=6936686b81ae8c5ba6606dc8b4ce5fdebd3f9e15;hb=304e64fb34b32659be1bbfd39fb4e15b2f79586e;hp=d5c3ed3acf8456a0fa3b2d7d51d3cce80edf7038;hpb=cfb79b69d9fa44595560659bd95d1d1cd27677ad;p=jalview.git diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java index d5c3ed3..6936686 100644 --- a/src/jalview/io/SequenceAnnotationReport.java +++ b/src/jalview/io/SequenceAnnotationReport.java @@ -20,6 +20,8 @@ */ package jalview.io; +import java.util.Locale; + import java.util.Collection; import java.util.Comparator; import java.util.LinkedHashMap; @@ -274,7 +276,7 @@ public class SequenceAnnotationReport * truncate overlong descriptions unless they contain an href * before the truncation point (as truncation could leave corrupted html) */ - int linkindex = description.toLowerCase().indexOf(" -1 && linkindex < MAX_DESCRIPTION_LENGTH; if ( @@ -403,8 +405,8 @@ public class SequenceAnnotationReport + "\" target=\"" + urllink.get(0) + "\">" - + (urllink.get(0).toLowerCase() - .equals(urllink.get(1).toLowerCase()) ? urllink + + (urllink.get(0).toLowerCase(Locale.ROOT) + .equals(urllink.get(1).toLowerCase(Locale.ROOT)) ? urllink .get(0) : (urllink.get(0) + ":" + urllink .get(1))) + "
");