X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FSequenceAnnotationReport.java;h=4d0bec720b3aaf6e357f3395b5cdc66ea7e0b2ba;hb=64741412a510f134a0e08fc87d1e84d938022dbb;hp=8e4e78305e2c41e01d172b21eee8babf757cf1c5;hpb=31f53b929912da9b5e15187af2d9557393655b05;p=jalview.git
diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java
index 8e4e783..4d0bec7 100644
--- a/src/jalview/io/SequenceAnnotationReport.java
+++ b/src/jalview/io/SequenceAnnotationReport.java
@@ -237,7 +237,7 @@ public class SequenceAnnotationReport
{
if (sb0.length() > 6)
{
- sb.append("
");
+ sb.append("
");
}
sb.append(feature.getType()).append(" ").append(begin).append(":")
.append(end);
@@ -247,7 +247,7 @@ public class SequenceAnnotationReport
if (sb0.length() > 6)
{
- sb.append("
");
+ sb.append("
");
}
// TODO: remove this hack to display link only features
boolean linkOnly = feature.getValue("linkonly") != null;
@@ -276,7 +276,9 @@ public class SequenceAnnotationReport
int linkindex = description.toLowerCase().indexOf(" -1
&& linkindex < MAX_DESCRIPTION_LENGTH;
- if (description.length() > MAX_DESCRIPTION_LENGTH && !hasLink)
+ if (
+ // BH suggestion maxlength == 0 &&
+ description.length() > MAX_DESCRIPTION_LENGTH && !hasLink)
{
description = description.substring(0, MAX_DESCRIPTION_LENGTH)
+ ELLIPSIS;
@@ -395,7 +397,7 @@ public class SequenceAnnotationReport
{
for (List urllink : createLinksFrom(null, urlstring))
{
- sb.append("
");
+ + "
");
}
} catch (Exception x)
{
@@ -561,7 +563,7 @@ public class SequenceAnnotationReport
countForSource++;
if (countForSource == 1 || !summary)
{
- sb.append("
");
+ sb.append("
");
}
if (countForSource <= MAX_REFS_PER_SOURCE || !summary)
{
@@ -587,11 +589,11 @@ public class SequenceAnnotationReport
}
if (moreSources)
{
- sb.append("
").append(source).append(COMMA).append(ELLIPSIS);
+ sb.append("
").append(source).append(COMMA).append(ELLIPSIS);
}
if (ellipsis)
{
- sb.append("
(");
+ sb.append("
(");
sb.append(MessageManager.getString("label.output_seq_details"));
sb.append(")");
}