X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fgff%2FExonerateHelper.java;h=9ce4cc6dcf8be48e189bc36524a5210dc479173f;hb=9d2408483e451285fd555c3cd6e0273977acbaa7;hp=da0c245e5f604171d177fe5ad5771b662d1654f9;hpb=214ad7e089fdf9cde66ac5e5d56d498101bbe2c3;p=jalview.git diff --git a/src/jalview/io/gff/ExonerateHelper.java b/src/jalview/io/gff/ExonerateHelper.java index da0c245..9ce4cc6 100644 --- a/src/jalview/io/gff/ExonerateHelper.java +++ b/src/jalview/io/gff/ExonerateHelper.java @@ -20,6 +20,8 @@ */ package jalview.io.gff; +import java.util.Locale; + import jalview.datamodel.AlignedCodonFrame; import jalview.datamodel.AlignmentI; import jalview.datamodel.MappingType; @@ -341,7 +343,7 @@ public class ExonerateHelper extends Gff2Helper // e.g. exonerate:protein2genome:local if (model != null) { - String mdl = model.toLowerCase(); + String mdl = model.toLowerCase(Locale.ROOT); if (mdl.contains(PROTEIN2DNA) || mdl.contains(PROTEIN2GENOME) || mdl.contains(CODING2CODING) || mdl.contains(CODING2GENOME) || mdl.contains(CDNA2GENOME) || mdl.contains(GENOME2GENOME))