X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fgff%2FInterProScanHelper.java;fp=src%2Fjalview%2Fio%2Fgff%2FInterProScanHelper.java;h=141b6770c899ed9560fc34a813a071c359e02063;hb=586ade46bdcd05ff028a1cff82c3c527326d28ec;hp=948cdd2d4065eb5555a22b50164f25f613e46555;hpb=adcef27f5747b4e70e89a56c3735bc3afb8ce9bf;p=jalview.git diff --git a/src/jalview/io/gff/InterProScanHelper.java b/src/jalview/io/gff/InterProScanHelper.java index 948cdd2..141b677 100644 --- a/src/jalview/io/gff/InterProScanHelper.java +++ b/src/jalview/io/gff/InterProScanHelper.java @@ -108,7 +108,7 @@ public class InterProScanHelper extends Gff3Helper */ public static boolean recognises(String[] columns) { - SequenceOntologyI so = SequenceOntologyFactory.getInstance(); + SequenceOntologyI so = SequenceOntologyFactory.getSequenceOntology(); String type = columns[TYPE_COL]; if (so.isA(type, SequenceOntologyI.PROTEIN_MATCH) || (".".equals(columns[SOURCE_COL])