X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fgff%2FInterProScanHelper.java;fp=src%2Fjalview%2Fio%2Fgff%2FInterProScanHelper.java;h=948cdd2d4065eb5555a22b50164f25f613e46555;hb=4f77328104498504339216829abf5ea87e2791ec;hp=141b6770c899ed9560fc34a813a071c359e02063;hpb=2b8c0785318a3528e1876e8e2dd48b7d831eae69;p=jalview.git diff --git a/src/jalview/io/gff/InterProScanHelper.java b/src/jalview/io/gff/InterProScanHelper.java index 141b677..948cdd2 100644 --- a/src/jalview/io/gff/InterProScanHelper.java +++ b/src/jalview/io/gff/InterProScanHelper.java @@ -108,7 +108,7 @@ public class InterProScanHelper extends Gff3Helper */ public static boolean recognises(String[] columns) { - SequenceOntologyI so = SequenceOntologyFactory.getSequenceOntology(); + SequenceOntologyI so = SequenceOntologyFactory.getInstance(); String type = columns[TYPE_COL]; if (so.isA(type, SequenceOntologyI.PROTEIN_MATCH) || (".".equals(columns[SOURCE_COL])