X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fpacked%2FJalviewDataset.java;fp=src%2Fjalview%2Fio%2Fpacked%2FJalviewDataset.java;h=9f84c16235cf5d79116a61501dc6c2e3c50406aa;hb=c2e5d3d1ebe3b283bdde15637c590721cd6c5637;hp=c1ca1b7a28765621332c821cd6c0f7f772f29a87;hpb=557859a3ea9a1e86899ef2033de90eadb6d87118;p=jalview.git diff --git a/src/jalview/io/packed/JalviewDataset.java b/src/jalview/io/packed/JalviewDataset.java index c1ca1b7..9f84c16 100644 --- a/src/jalview/io/packed/JalviewDataset.java +++ b/src/jalview/io/packed/JalviewDataset.java @@ -20,6 +20,7 @@ */ package jalview.io.packed; +import jalview.analysis.TreeModel; import jalview.api.FeatureColourI; import jalview.datamodel.AlignmentI; import jalview.datamodel.SequenceI; @@ -151,8 +152,7 @@ public class JalviewDataset { // the following works because all trees are already had node/SequenceI // associations created. - jalview.analysis.NJTree njt = new jalview.analysis.NJTree( - al.getSequencesArray(), nf); + TreeModel njt = new TreeModel(al.getSequencesArray(), null, nf); // this just updates the displayed leaf name on the tree according to // the SequenceIs. njt.renameAssociatedNodes();