X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fpacked%2FParsePackedSet.java;fp=src%2Fjalview%2Fio%2Fpacked%2FParsePackedSet.java;h=16356829a7061513c635c95c9711f665810799e6;hb=f063821ed0be9c1581af74643a1aa5798731af65;hp=138fef717606bb6e7af189c2390a9f5457212daf;hpb=fd18e2c73cd015d4e38ad91da0e5d7532ff0ef42;p=jalview.git

diff --git a/src/jalview/io/packed/ParsePackedSet.java b/src/jalview/io/packed/ParsePackedSet.java
index 138fef7..1635682 100644
--- a/src/jalview/io/packed/ParsePackedSet.java
+++ b/src/jalview/io/packed/ParsePackedSet.java
@@ -157,7 +157,8 @@ public class ParsePackedSet
         {
           jalview.io.FeaturesFile ff = new jalview.io.FeaturesFile(src);
           context.updateSetModified(ff.parse(context.getLastAlignment(),
-                  context.featureColours, false, context.relaxedIdMatching));
+                  context.featureColours, false,
+                  context.relaxedIdMatching));
         } catch (Exception e)
         {
           errmsg = ("Failed to parse the Features file associated with the alignment.");
@@ -232,8 +233,8 @@ public class ParsePackedSet
     {
       String type = args[i++];
       final String file = args[i++];
-      final JvDataType jtype = DataProvider.JvDataType.valueOf(type
-              .toUpperCase());
+      final JvDataType jtype = DataProvider.JvDataType
+              .valueOf(type.toUpperCase());
       if (jtype != null)
       {
         final FileParse fp;
@@ -271,8 +272,8 @@ public class ParsePackedSet
     ParsePackedSet pps;
     try
     {
-      newdm = (pps = new ParsePackedSet()).getAlignment(
-              context = new JalviewDataset(), dp);
+      newdm = (pps = new ParsePackedSet())
+              .getAlignment(context = new JalviewDataset(), dp);
     } catch (Exception e)
     {
       System.out.println("Test failed for these arguments.\n");
@@ -296,8 +297,8 @@ public class ParsePackedSet
     {
       if (context.getLastAlignmentSet().isModified())
       {
-        System.err
-                .println("Initial alignment set was modified and any associated views should be updated.");
+        System.err.println(
+                "Initial alignment set was modified and any associated views should be updated.");
       }
     }
   }