X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fvamsas%2FDbref.java;fp=src%2Fjalview%2Fio%2Fvamsas%2FDbref.java;h=91bf66625105a910dcf8f08894503fe7042db554;hb=4b4f8f64b569ca51b56062fa34be5e5d8bebc1cc;hp=bdef00f9ff65e862a41525af12ebe564285d86de;hpb=c644d68815914fde56a86d66e2d6f310eef63b51;p=jalview.git

diff --git a/src/jalview/io/vamsas/Dbref.java b/src/jalview/io/vamsas/Dbref.java
index bdef00f..91bf666 100644
--- a/src/jalview/io/vamsas/Dbref.java
+++ b/src/jalview/io/vamsas/Dbref.java
@@ -20,6 +20,7 @@
  */
 package jalview.io.vamsas;
 
+import jalview.bin.Console;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.SequenceI;
 import jalview.io.VamsasAppDatastore;
@@ -92,7 +93,7 @@ public class Dbref extends Rangetype
     }
     else
     {
-      jalview.bin.Cache.log.debug(
+      Console.debug(
               "Ignoring mapless DbRef.Map " + jvobj.getSrcAccString());
     }
 
@@ -158,8 +159,7 @@ public class Dbref extends Rangetype
       // TODO: Jalview ignores all the other maps
       if (vobj.getMapCount() > 1)
       {
-        jalview.bin.Cache.log
-                .debug("Ignoring additional mappings on DbRef: "
+        Console.debug("Ignoring additional mappings on DbRef: "
                         + jvobj.getSource() + ":" + jvobj.getAccessionId());
       }
       jalview.datamodel.Mapping mp = new jalview.datamodel.Mapping(
@@ -175,8 +175,7 @@ public class Dbref extends Rangetype
   {
     DbRef vobj = (DbRef) this.vobj;
     DBRefEntry jvobj = (DBRefEntry) this.jvobj;
-    jalview.bin.Cache.log
-            .debug("Conflict in dbentry update for " + vobj.getAccessionId()
+    Console.debug("Conflict in dbentry update for " + vobj.getAccessionId()
                     + vobj.getSource() + " " + vobj.getVorbaId());
     // TODO Auto-generated method stub
 
@@ -195,8 +194,7 @@ public class Dbref extends Rangetype
       // TODO: Jalview ignores all the other maps
       if (vobj.getMapCount() > 1)
       {
-        jalview.bin.Cache.log
-                .debug("Ignoring additional mappings on DbRef: "
+        Console.debug("Ignoring additional mappings on DbRef: "
                         + jvobj.getSource() + ":" + jvobj.getAccessionId());
       }
       jalview.datamodel.Mapping mp = new jalview.datamodel.Mapping(
@@ -230,7 +228,7 @@ public class Dbref extends Rangetype
       }
       else
       {
-        jalview.bin.Cache.log.debug(
+        Console.debug(
                 "Ignoring mapless DbRef.Map " + jvobj.getSrcAccString());
       }
     }