X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGAlignFrame.java;fp=src%2Fjalview%2Fjbgui%2FGAlignFrame.java;h=ab8653de612b32dcf0e1e1a5f9cf6318e537f2a5;hb=2abeb29371cdf22173026ec89ea5d3a3fd50faae;hp=6685c67c589abf56cf914af2d41a4089f1a0f1c9;hpb=72943d968f678ca4e34f1b701823d6dab51ff3a2;p=jalview.git

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 6685c67..ab8653d 100755
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -90,6 +90,8 @@ public class GAlignFrame extends JInternalFrame
 
   protected JCheckBoxMenuItem colourTextMenuItem = new JCheckBoxMenuItem();
 
+  protected JCheckBoxMenuItem colourGapsMenuItem = new JCheckBoxMenuItem();
+
   protected JCheckBoxMenuItem showNonconservedMenuItem = new JCheckBoxMenuItem();
 
   protected JMenuItem undoMenuItem = new JMenuItem();
@@ -657,7 +659,16 @@ public class GAlignFrame extends JInternalFrame
         colourTextMenuItem_actionPerformed(e);
       }
     });
-
+    colourGapsMenuItem = new JCheckBoxMenuItem(
+            MessageManager.getString("label.colour_gaps"));
+    colourGapsMenuItem.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent e)
+      {
+        colourGapsMenuItem_actionPerformed(e);
+      }
+    });
     JMenuItem htmlMenuItem = new JMenuItem(
             MessageManager.getString("label.html"));
     htmlMenuItem.addActionListener(new ActionListener()
@@ -1898,6 +1909,7 @@ public class GAlignFrame extends JInternalFrame
     formatMenu.add(viewTextMenuItem);
     formatMenu.add(colourTextMenuItem);
     formatMenu.add(renderGapsMenuItem);
+    formatMenu.add(colourGapsMenuItem);
     formatMenu.add(centreColumnLabelsMenuItem);
     formatMenu.add(showNonconservedMenuItem);
     selectMenu.add(findMenuItem);
@@ -1918,6 +1930,12 @@ public class GAlignFrame extends JInternalFrame
     // selectMenu.add(listenToViewSelections);
   }
 
+  protected void colourGapsMenuItem_actionPerformed(ActionEvent e)
+  {
+    // TODO Auto-generated method stub
+    
+  }
+
   protected void loadVcf_actionPerformed()
   {
   }