X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fjbgui%2FGPreferences.java;fp=src%2Fjalview%2Fjbgui%2FGPreferences.java;h=1ca0802af1c1a2a8ef715df1ff8bd106cdcff761;hb=0efc6021e63ff62bb2e275501586c1900561b303;hp=633d2b894f098a5b559986608ce2a3064de4a9ff;hpb=771d1758a42abc6e3e330dd6c5117734acf0067f;p=jalview.git

diff --git a/src/jalview/jbgui/GPreferences.java b/src/jalview/jbgui/GPreferences.java
index 633d2b8..1ca0802 100755
--- a/src/jalview/jbgui/GPreferences.java
+++ b/src/jalview/jbgui/GPreferences.java
@@ -95,11 +95,11 @@ public class GPreferences extends JPanel
 
   protected JCheckBox rightAlign = new JCheckBox();
 
-  protected JComboBox<String> fontSizeCB = new JComboBox<String>();
+  protected JComboBox<String> fontSizeCB = new JComboBox<>();
 
-  protected JComboBox<String> fontStyleCB = new JComboBox<String>();
+  protected JComboBox<String> fontStyleCB = new JComboBox<>();
 
-  protected JComboBox<String> fontNameCB = new JComboBox<String>();
+  protected JComboBox<String> fontNameCB = new JComboBox<>();
 
   protected JCheckBox showOccupancy = new JCheckBox();
 
@@ -111,15 +111,15 @@ public class GPreferences extends JPanel
 
   protected JCheckBox scaleProteinToCdna = new JCheckBox();
 
-  protected JComboBox<String> gapSymbolCB = new JComboBox<String>();
+  protected JComboBox<String> gapSymbolCB = new JComboBox<>();
 
   protected JCheckBox wrap = new JCheckBox();
 
-  protected JComboBox<String> sortby = new JComboBox<String>();
+  protected JComboBox<String> sortby = new JComboBox<>();
 
-  protected JComboBox<String> sortAnnBy = new JComboBox<String>();
+  protected JComboBox<String> sortAnnBy = new JComboBox<>();
 
-  protected JComboBox<String> sortAutocalc = new JComboBox<String>();
+  protected JComboBox<String> sortAutocalc = new JComboBox<>();
 
   protected JCheckBox startupCheckbox = new JCheckBox();
 
@@ -159,7 +159,7 @@ public class GPreferences extends JPanel
 
   protected JCheckBox addTempFactor = new JCheckBox();
 
-  protected JComboBox<String> structViewer = new JComboBox<String>();
+  protected JComboBox<String> structViewer = new JComboBox<>();
 
   protected JTextField chimeraPath = new JTextField();
 
@@ -176,9 +176,22 @@ public class GPreferences extends JPanel
 
   protected JPanel maxColour = new JPanel();
 
-  protected JComboBox<String> protColour = new JComboBox<String>();
+  protected JComboBox<String> protColour = new JComboBox<>();
 
-  protected JComboBox<String> nucColour = new JComboBox<String>();
+  protected JComboBox<String> nucColour = new JComboBox<>();
+
+  /*
+   * Overview tab components
+   */
+  protected JPanel gapColour = new JPanel();
+
+  protected JPanel hiddenColour = new JPanel();
+
+  protected JCheckBox useLegacyGap;
+
+  protected JCheckBox showHiddenAtStart;
+
+  protected JLabel gapLabel;
 
   /*
    * Connections tab components
@@ -216,7 +229,7 @@ public class GPreferences extends JPanel
   /*
    * Output tab components
    */
-  protected JComboBox<Object> epsRendering = new JComboBox<Object>();
+  protected JComboBox<Object> epsRendering = new JComboBox<>();
 
   protected JLabel userIdWidthlabel = new JLabel();
 
@@ -294,6 +307,9 @@ public class GPreferences extends JPanel
     tabbedPane.add(initColoursTab(),
             MessageManager.getString("label.colours"));
 
+    tabbedPane.add(initOverviewTab(),
+            MessageManager.getString("label.overview"));
+
     tabbedPane.add(initStructureTab(),
             MessageManager.getString("label.structure"));
 
@@ -963,6 +979,151 @@ public class GPreferences extends JPanel
   }
 
   /**
+   * Initialises the Overview tabbed panel.
+   * 
+   * @return
+   */
+  private JPanel initOverviewTab()
+  {
+    JPanel overviewPanel = new JPanel();
+    overviewPanel.setBorder(new TitledBorder(
+            MessageManager.getString("label.overview_settings")));
+
+    gapColour.setFont(LABEL_FONT);
+    // fixing the border colours stops apparent colour bleed from the panel
+    gapColour.setBorder(
+            BorderFactory.createEtchedBorder(Color.white, Color.lightGray));
+    gapColour.setPreferredSize(new Dimension(40, 20));
+    gapColour.addMouseListener(new MouseAdapter()
+    {
+      @Override
+      public void mousePressed(MouseEvent e)
+      {
+        gapColour_actionPerformed(gapColour);
+      }
+    });
+
+    hiddenColour.setFont(LABEL_FONT);
+    // fixing the border colours stops apparent colour bleed from the panel
+    hiddenColour.setBorder(
+            BorderFactory.createEtchedBorder(Color.white, Color.lightGray));
+    hiddenColour.setPreferredSize(new Dimension(40, 20));
+    hiddenColour.addMouseListener(new MouseAdapter()
+    {
+      @Override
+      public void mousePressed(MouseEvent e)
+      {
+        hiddenColour_actionPerformed(hiddenColour);
+      }
+    });
+    
+    useLegacyGap = new JCheckBox(
+            MessageManager.getString("label.ov_legacy_gap"));
+    useLegacyGap.setFont(LABEL_FONT);
+    useLegacyGap.setHorizontalAlignment(SwingConstants.LEFT);
+    useLegacyGap.setVerticalTextPosition(SwingConstants.TOP);
+    gapLabel = new JLabel(
+            MessageManager.getString("label.gap_colour"));
+    gapLabel.setFont(LABEL_FONT);
+    gapLabel.setHorizontalAlignment(SwingConstants.LEFT);
+    gapLabel.setVerticalTextPosition(SwingConstants.TOP);
+    showHiddenAtStart = new JCheckBox(
+            MessageManager.getString("label.ov_show_hide_default"));
+    showHiddenAtStart.setFont(LABEL_FONT);
+    showHiddenAtStart.setHorizontalAlignment(SwingConstants.LEFT);
+    showHiddenAtStart.setVerticalTextPosition(SwingConstants.TOP);
+    JLabel hiddenLabel = new JLabel(
+            MessageManager.getString("label.hidden_colour"));
+    hiddenLabel.setFont(LABEL_FONT);
+    hiddenLabel.setHorizontalAlignment(SwingConstants.LEFT);
+    hiddenLabel.setVerticalTextPosition(SwingConstants.TOP);
+
+    useLegacyGap.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent e)
+      {
+        useLegacyGaps_actionPerformed(e);
+      }
+    });
+
+    overviewPanel.setLayout(new GridBagLayout());
+    GridBagConstraints c1 = new GridBagConstraints();
+
+    c1.fill = GridBagConstraints.HORIZONTAL;
+    c1.gridx = 0;
+    c1.gridy = 0;
+    c1.weightx = 1;
+    c1.ipady = 20;
+    c1.anchor = GridBagConstraints.FIRST_LINE_START;
+    overviewPanel.add(useLegacyGap, c1);
+
+    GridBagConstraints c2 = new GridBagConstraints();
+    c2.fill = GridBagConstraints.HORIZONTAL;
+    c2.gridx = 1;
+    c2.gridy = 0;
+    c2.insets = new Insets(0, 15, 0, 10);
+    overviewPanel.add(gapLabel, c2);
+
+    GridBagConstraints c3 = new GridBagConstraints();
+    c3.fill = GridBagConstraints.HORIZONTAL;
+    c3.gridx = 2;
+    c3.gridy = 0;
+    c3.insets = new Insets(0, 0, 0, 15);
+    overviewPanel.add(gapColour, c3);
+
+    GridBagConstraints c4 = new GridBagConstraints();
+    c4.fill = GridBagConstraints.HORIZONTAL;
+    c4.gridx = 0;
+    c4.gridy = 1;
+    c4.weightx = 1;
+    overviewPanel.add(showHiddenAtStart, c4);
+
+    GridBagConstraints c5 = new GridBagConstraints();
+    c5.fill = GridBagConstraints.HORIZONTAL;
+    c5.gridx = 1;
+    c5.gridy = 1;
+    c5.insets = new Insets(0, 15, 0, 10);
+    overviewPanel.add(hiddenLabel, c5);
+
+    GridBagConstraints c6 = new GridBagConstraints();
+    c6.fill = GridBagConstraints.HORIZONTAL;
+    c6.gridx = 2;
+    c6.gridy = 1;
+    c6.insets = new Insets(0, 0, 0, 15);
+    overviewPanel.add(hiddenColour, c6);
+
+    JButton resetButton = new JButton(
+            MessageManager.getString("label.reset_to_defaults"));
+
+    resetButton.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent e)
+      {
+        resetOvDefaults_actionPerformed(e);
+      }
+    });
+
+    GridBagConstraints c7 = new GridBagConstraints();
+    c7.fill = GridBagConstraints.NONE;
+    c7.gridx = 0;
+    c7.gridy = 2;
+    c7.insets = new Insets(10, 0, 0, 0);
+    c7.anchor = GridBagConstraints.WEST;
+    overviewPanel.add(resetButton, c7);
+
+    // Add padding so the panel doesn't look ridiculous
+    JPanel spacePanel = new JPanel();
+    overviewPanel.add(spacePanel,
+            new GridBagConstraints(0, 3, 1, 1, 1.0, 1.0,
+                    GridBagConstraints.WEST, GridBagConstraints.BOTH,
+                    new Insets(0, 0, 0, 5), 0, 0));
+
+    return overviewPanel;
+  }
+
+  /**
    * Initialises the Structure tabbed panel.
    * 
    * @return
@@ -1494,12 +1655,28 @@ public class GPreferences extends JPanel
   {
   }
 
+  protected void gapColour_actionPerformed(JPanel panel)
+  {
+  }
+
+  protected void hiddenColour_actionPerformed(JPanel panel)
+  {
+  }
+
   protected void showunconserved_actionPerformed(ActionEvent e)
   {
     // TODO Auto-generated method stub
 
   }
 
+  protected void useLegacyGaps_actionPerformed(ActionEvent e)
+  {
+  }
+
+  protected void resetOvDefaults_actionPerformed(ActionEvent e)
+  {
+  }
+
   /**
    * DOCUMENT ME!
    *