X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fproject%2FJalview2XML.java;h=6f26036517455f2762710b69aebc28cd9335c8e3;hb=beb2fee66dde629e3bbb7febb38d0116e1a64df2;hp=4a2c96e83d08548912f2f106f8e5d13c539cfb88;hpb=80b889f0cca49103e1b20ed806755a0719789906;p=jalview.git

diff --git a/src/jalview/project/Jalview2XML.java b/src/jalview/project/Jalview2XML.java
index 4a2c96e..6f26036 100644
--- a/src/jalview/project/Jalview2XML.java
+++ b/src/jalview/project/Jalview2XML.java
@@ -2339,7 +2339,6 @@ public class Jalview2XML
               {
                 xmlmat.setCutHeight(cm.getCutHeight());
               }
-
               // set/get properties
               if (cm instanceof MappableContactMatrixI)
               {
@@ -2517,7 +2516,6 @@ public class Jalview2XML
     return BitSet.valueOf(newlongvals);
 
   }
-
   private CalcIdParam createCalcIdParam(String calcId, AlignViewport av)
   {
     AutoCalcSetting settings = av.getCalcIdSettingsFor(calcId);
@@ -4090,7 +4088,6 @@ public class Jalview2XML
                     Console.log.info(
                             "Ignoring additional clusterings for contact matrix");
                   }
-
                   String treeMethod = xmlmat.getTreeMethod();
                   double thresh = xmlmat.getCutHeight() != null
                           ? xmlmat.getCutHeight()