X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Frenderer%2FAnnotationRenderer.java;fp=src%2Fjalview%2Frenderer%2FAnnotationRenderer.java;h=09152d69662e720be130742507c141dea6f4fdd3;hb=d1d2ea58719115718d0672a9f8fb85c48a908468;hp=bafa3e720201b93a89ba1060bab86029fb05cd90;hpb=41cf7490bf0e3749530ea293f770bdf066d64c3c;p=jalview.git diff --git a/src/jalview/renderer/AnnotationRenderer.java b/src/jalview/renderer/AnnotationRenderer.java index bafa3e7..09152d6 100644 --- a/src/jalview/renderer/AnnotationRenderer.java +++ b/src/jalview/renderer/AnnotationRenderer.java @@ -240,7 +240,7 @@ public class AnnotationRenderer } // TODO extend annotation row to enable dynamic and static profile data to // be stored - if (aa.groupRef == null && aa.sequenceRef == null && av_renderProfile) + if (aa.groupRef == null && aa.sequenceRef == null) { return AAFrequency.extractProfile(hconsensus[column], av_ignoreGapsConsensus); @@ -262,7 +262,7 @@ public class AnnotationRenderer // to // be stored if (aa.groupRef == null && aa.sequenceRef == null - && av_renderProfile && hStrucConsensus != null + && hStrucConsensus != null && hStrucConsensus.length > column) { return StructureFrequency.extractProfile(hStrucConsensus[column],