X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FAlcodMap.java;fp=src%2Fjalview%2Fschemabinding%2Fversion2%2FAlcodMap.java;h=0000000000000000000000000000000000000000;hb=116f357c7b1056f7c20dd0f7ecbcb50ea50e4e72;hp=e2522a1d51506230dc69c8faa0e6cb30975004a1;hpb=3997675132f682a045f2074c31dceedfbc1a3895;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/AlcodMap.java b/src/jalview/schemabinding/version2/AlcodMap.java
deleted file mode 100644
index e2522a1..0000000
--- a/src/jalview/schemabinding/version2/AlcodMap.java
+++ /dev/null
@@ -1,192 +0,0 @@
-/*
- * This class was automatically generated with 
- * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
- * Schema.
- * $Id$
- */
-
-package jalview.schemabinding.version2;
-
-//---------------------------------/
-//- Imported classes and packages -/
-//---------------------------------/
-
-import org.exolab.castor.xml.Marshaller;
-import org.exolab.castor.xml.Unmarshaller;
-
-/**
- * Class AlcodMap.
- * 
- * @version $Revision$ $Date$
- */
-public class AlcodMap implements java.io.Serializable
-{
-
-  // --------------------------/
-  // - Class/Member Variables -/
-  // --------------------------/
-
-  /**
-   * internal jalview id for the dnasq for this mapping.
-   * 
-   */
-  private java.lang.String _dnasq;
-
-  /**
-   * a Mapping entry and an associated protein sequence
-   * 
-   */
-  private jalview.schemabinding.version2.Mapping _mapping;
-
-  // ----------------/
-  // - Constructors -/
-  // ----------------/
-
-  public AlcodMap()
-  {
-    super();
-  }
-
-  // -----------/
-  // - Methods -/
-  // -----------/
-
-  /**
-   * Returns the value of field 'dnasq'. The field 'dnasq' has the following
-   * description: internal jalview id for the dnasq for this mapping.
-   * 
-   * 
-   * @return the value of field 'Dnasq'.
-   */
-  public java.lang.String getDnasq()
-  {
-    return this._dnasq;
-  }
-
-  /**
-   * Returns the value of field 'mapping'. The field 'mapping' has the following
-   * description: a Mapping entry and an associated protein sequence
-   * 
-   * 
-   * @return the value of field 'Mapping'.
-   */
-  public jalview.schemabinding.version2.Mapping getMapping()
-  {
-    return this._mapping;
-  }
-
-  /**
-   * Method isValid.
-   * 
-   * @return true if this object is valid according to the schema
-   */
-  public boolean isValid()
-  {
-    try
-    {
-      validate();
-    } catch (org.exolab.castor.xml.ValidationException vex)
-    {
-      return false;
-    }
-    return true;
-  }
-
-  /**
-   * 
-   * 
-   * @param out
-   * @throws org.exolab.castor.xml.MarshalException
-   *           if object is null or if any SAXException is thrown during
-   *           marshaling
-   * @throws org.exolab.castor.xml.ValidationException
-   *           if this object is an invalid instance according to the schema
-   */
-  public void marshal(final java.io.Writer out)
-          throws org.exolab.castor.xml.MarshalException,
-          org.exolab.castor.xml.ValidationException
-  {
-    Marshaller.marshal(this, out);
-  }
-
-  /**
-   * 
-   * 
-   * @param handler
-   * @throws java.io.IOException
-   *           if an IOException occurs during marshaling
-   * @throws org.exolab.castor.xml.ValidationException
-   *           if this object is an invalid instance according to the schema
-   * @throws org.exolab.castor.xml.MarshalException
-   *           if object is null or if any SAXException is thrown during
-   *           marshaling
-   */
-  public void marshal(final org.xml.sax.ContentHandler handler)
-          throws java.io.IOException,
-          org.exolab.castor.xml.MarshalException,
-          org.exolab.castor.xml.ValidationException
-  {
-    Marshaller.marshal(this, handler);
-  }
-
-  /**
-   * Sets the value of field 'dnasq'. The field 'dnasq' has the following
-   * description: internal jalview id for the dnasq for this mapping.
-   * 
-   * 
-   * @param dnasq
-   *          the value of field 'dnasq'.
-   */
-  public void setDnasq(final java.lang.String dnasq)
-  {
-    this._dnasq = dnasq;
-  }
-
-  /**
-   * Sets the value of field 'mapping'. The field 'mapping' has the following
-   * description: a Mapping entry and an associated protein sequence
-   * 
-   * 
-   * @param mapping
-   *          the value of field 'mapping'.
-   */
-  public void setMapping(
-          final jalview.schemabinding.version2.Mapping mapping)
-  {
-    this._mapping = mapping;
-  }
-
-  /**
-   * Method unmarshal.
-   * 
-   * @param reader
-   * @throws org.exolab.castor.xml.MarshalException
-   *           if object is null or if any SAXException is thrown during
-   *           marshaling
-   * @throws org.exolab.castor.xml.ValidationException
-   *           if this object is an invalid instance according to the schema
-   * @return the unmarshaled jalview.schemabinding.version2.AlcodMap
-   */
-  public static jalview.schemabinding.version2.AlcodMap unmarshal(
-          final java.io.Reader reader)
-          throws org.exolab.castor.xml.MarshalException,
-          org.exolab.castor.xml.ValidationException
-  {
-    return (jalview.schemabinding.version2.AlcodMap) Unmarshaller
-            .unmarshal(jalview.schemabinding.version2.AlcodMap.class,
-                    reader);
-  }
-
-  /**
-   * 
-   * 
-   * @throws org.exolab.castor.xml.ValidationException
-   *           if this object is an invalid instance according to the schema
-   */
-  public void validate() throws org.exolab.castor.xml.ValidationException
-  {
-    org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
-    validator.validate(this);
-  }
-
-}