X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FFeatureMatcher.java;fp=src%2Fjalview%2Fschemabinding%2Fversion2%2FFeatureMatcher.java;h=0000000000000000000000000000000000000000;hb=aace9d05c0870c703bfdfb28c1608213cee019bf;hp=4d29cab33bc4f166b9f62ccd47d73348ca6fabe1;hpb=2a3bac30ae8290e912eb7ffe7ff7ec700b6cfaac;p=jalview.git diff --git a/src/jalview/schemabinding/version2/FeatureMatcher.java b/src/jalview/schemabinding/version2/FeatureMatcher.java deleted file mode 100644 index 4d29cab..0000000 --- a/src/jalview/schemabinding/version2/FeatureMatcher.java +++ /dev/null @@ -1,383 +0,0 @@ -/* - * This class was automatically generated with - * Castor 1.1, using an XML - * Schema. - * $Id$ - */ - -package jalview.schemabinding.version2; - -//---------------------------------/ -//- Imported classes and packages -/ -//---------------------------------/ - -import org.exolab.castor.xml.Marshaller; -import org.exolab.castor.xml.Unmarshaller; - -/** - * Class FeatureMatcher. - * - * @version $Revision$ $Date$ - */ -public class FeatureMatcher implements java.io.Serializable -{ - - // --------------------------/ - // - Class/Member Variables -/ - // --------------------------/ - - /** - * Field _by. - */ - private jalview.schemabinding.version2.types.FeatureMatcherByType _by; - - /** - * name of feature attribute to filter on, or attribute and sub-attribute - */ - private java.util.Vector _attributeNameList; - - /** - * Field _condition. - */ - private java.lang.String _condition; - - /** - * Field _value. - */ - private java.lang.String _value; - - // ----------------/ - // - Constructors -/ - // ----------------/ - - public FeatureMatcher() - { - super(); - this._attributeNameList = new java.util.Vector(); - } - - // -----------/ - // - Methods -/ - // -----------/ - - /** - * - * - * @param vAttributeName - * @throws java.lang.IndexOutOfBoundsException - * if the index given is outside the bounds of the collection - */ - public void addAttributeName(final java.lang.String vAttributeName) - throws java.lang.IndexOutOfBoundsException - { - // check for the maximum size - if (this._attributeNameList.size() >= 2) - { - throw new IndexOutOfBoundsException( - "addAttributeName has a maximum of 2"); - } - - this._attributeNameList.addElement(vAttributeName); - } - - /** - * - * - * @param index - * @param vAttributeName - * @throws java.lang.IndexOutOfBoundsException - * if the index given is outside the bounds of the collection - */ - public void addAttributeName(final int index, - final java.lang.String vAttributeName) - throws java.lang.IndexOutOfBoundsException - { - // check for the maximum size - if (this._attributeNameList.size() >= 2) - { - throw new IndexOutOfBoundsException( - "addAttributeName has a maximum of 2"); - } - - this._attributeNameList.add(index, vAttributeName); - } - - /** - * Method enumerateAttributeName. - * - * @return an Enumeration over all java.lang.String elements - */ - public java.util.Enumeration enumerateAttributeName() - { - return this._attributeNameList.elements(); - } - - /** - * Method getAttributeName. - * - * @param index - * @throws java.lang.IndexOutOfBoundsException - * if the index given is outside the bounds of the collection - * @return the value of the java.lang.String at the given index - */ - public java.lang.String getAttributeName(final int index) - throws java.lang.IndexOutOfBoundsException - { - // check bounds for index - if (index < 0 || index >= this._attributeNameList.size()) - { - throw new IndexOutOfBoundsException("getAttributeName: Index value '" - + index + "' not in range [0.." - + (this._attributeNameList.size() - 1) + "]"); - } - - return (java.lang.String) _attributeNameList.get(index); - } - - /** - * Method getAttributeName.Returns the contents of the collection in an Array. - *

- * Note: Just in case the collection contents are changing in another thread, - * we pass a 0-length Array of the correct type into the API call. This way we - * know that the Array returned is of exactly the correct length. - * - * @return this collection as an Array - */ - public java.lang.String[] getAttributeName() - { - java.lang.String[] array = new java.lang.String[0]; - return (java.lang.String[]) this._attributeNameList.toArray(array); - } - - /** - * Method getAttributeNameCount. - * - * @return the size of this collection - */ - public int getAttributeNameCount() - { - return this._attributeNameList.size(); - } - - /** - * Returns the value of field 'by'. - * - * @return the value of field 'By'. - */ - public jalview.schemabinding.version2.types.FeatureMatcherByType getBy() - { - return this._by; - } - - /** - * Returns the value of field 'condition'. - * - * @return the value of field 'Condition'. - */ - public java.lang.String getCondition() - { - return this._condition; - } - - /** - * Returns the value of field 'value'. - * - * @return the value of field 'Value'. - */ - public java.lang.String getValue() - { - return this._value; - } - - /** - * Method isValid. - * - * @return true if this object is valid according to the schema - */ - public boolean isValid() - { - try - { - validate(); - } catch (org.exolab.castor.xml.ValidationException vex) - { - return false; - } - return true; - } - - /** - * - * - * @param out - * @throws org.exolab.castor.xml.MarshalException - * if object is null or if any SAXException is thrown during - * marshaling - * @throws org.exolab.castor.xml.ValidationException - * if this object is an invalid instance according to the schema - */ - public void marshal(final java.io.Writer out) - throws org.exolab.castor.xml.MarshalException, - org.exolab.castor.xml.ValidationException - { - Marshaller.marshal(this, out); - } - - /** - * - * - * @param handler - * @throws java.io.IOException - * if an IOException occurs during marshaling - * @throws org.exolab.castor.xml.ValidationException - * if this object is an invalid instance according to the schema - * @throws org.exolab.castor.xml.MarshalException - * if object is null or if any SAXException is thrown during - * marshaling - */ - public void marshal(final org.xml.sax.ContentHandler handler) - throws java.io.IOException, - org.exolab.castor.xml.MarshalException, - org.exolab.castor.xml.ValidationException - { - Marshaller.marshal(this, handler); - } - - /** - */ - public void removeAllAttributeName() - { - this._attributeNameList.clear(); - } - - /** - * Method removeAttributeName. - * - * @param vAttributeName - * @return true if the object was removed from the collection. - */ - public boolean removeAttributeName(final java.lang.String vAttributeName) - { - boolean removed = _attributeNameList.remove(vAttributeName); - return removed; - } - - /** - * Method removeAttributeNameAt. - * - * @param index - * @return the element removed from the collection - */ - public java.lang.String removeAttributeNameAt(final int index) - { - java.lang.Object obj = this._attributeNameList.remove(index); - return (java.lang.String) obj; - } - - /** - * - * - * @param index - * @param vAttributeName - * @throws java.lang.IndexOutOfBoundsException - * if the index given is outside the bounds of the collection - */ - public void setAttributeName(final int index, - final java.lang.String vAttributeName) - throws java.lang.IndexOutOfBoundsException - { - // check bounds for index - if (index < 0 || index >= this._attributeNameList.size()) - { - throw new IndexOutOfBoundsException("setAttributeName: Index value '" - + index + "' not in range [0.." - + (this._attributeNameList.size() - 1) + "]"); - } - - this._attributeNameList.set(index, vAttributeName); - } - - /** - * - * - * @param vAttributeNameArray - */ - public void setAttributeName(final java.lang.String[] vAttributeNameArray) - { - // -- copy array - _attributeNameList.clear(); - - for (int i = 0; i < vAttributeNameArray.length; i++) - { - this._attributeNameList.add(vAttributeNameArray[i]); - } - } - - /** - * Sets the value of field 'by'. - * - * @param by - * the value of field 'by'. - */ - public void setBy( - final jalview.schemabinding.version2.types.FeatureMatcherByType by) - { - this._by = by; - } - - /** - * Sets the value of field 'condition'. - * - * @param condition - * the value of field 'condition'. - */ - public void setCondition(final java.lang.String condition) - { - this._condition = condition; - } - - /** - * Sets the value of field 'value'. - * - * @param value - * the value of field 'value'. - */ - public void setValue(final java.lang.String value) - { - this._value = value; - } - - /** - * Method unmarshal. - * - * @param reader - * @throws org.exolab.castor.xml.MarshalException - * if object is null or if any SAXException is thrown during - * marshaling - * @throws org.exolab.castor.xml.ValidationException - * if this object is an invalid instance according to the schema - * @return the unmarshaled jalview.schemabinding.version2.FeatureMatcher - */ - public static jalview.schemabinding.version2.FeatureMatcher unmarshal( - final java.io.Reader reader) - throws org.exolab.castor.xml.MarshalException, - org.exolab.castor.xml.ValidationException - { - return (jalview.schemabinding.version2.FeatureMatcher) Unmarshaller - .unmarshal(jalview.schemabinding.version2.FeatureMatcher.class, - reader); - } - - /** - * - * - * @throws org.exolab.castor.xml.ValidationException - * if this object is an invalid instance according to the schema - */ - public void validate() throws org.exolab.castor.xml.ValidationException - { - org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); - validator.validate(this); - } - -}