X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2Fdescriptors%2FJalviewModelSequenceDescriptor.java;fp=src%2Fjalview%2Fschemabinding%2Fversion2%2Fdescriptors%2FJalviewModelSequenceDescriptor.java;h=e8c4ef4d9786086f30609aacbd73257800c1f50d;hb=9623cea766a766683243235557ad48e6f7659e6a;hp=e74d8ddc60ace76f0c14d964a5f59aa8803f6c25;hpb=6066400ed6b0fe288ebbea82389f59838a534706;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/descriptors/JalviewModelSequenceDescriptor.java b/src/jalview/schemabinding/version2/descriptors/JalviewModelSequenceDescriptor.java
index e74d8dd..e8c4ef4 100644
--- a/src/jalview/schemabinding/version2/descriptors/JalviewModelSequenceDescriptor.java
+++ b/src/jalview/schemabinding/version2/descriptors/JalviewModelSequenceDescriptor.java
@@ -7,8 +7,8 @@
 
 package jalview.schemabinding.version2.descriptors;
 
-  //---------------------------------/
- //- Imported classes and packages -/
+//---------------------------------/
+//- Imported classes and packages -/
 //---------------------------------/
 
 import jalview.schemabinding.version2.JalviewModelSequence;
@@ -18,385 +18,457 @@ import jalview.schemabinding.version2.JalviewModelSequence;
  * 
  * @version $Revision$ $Date$
  */
-public class JalviewModelSequenceDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
-
-
-      //--------------------------/
-     //- Class/Member Variables -/
-    //--------------------------/
-
-    /**
-     * Field _elementDefinition.
-     */
-    private boolean _elementDefinition;
-
-    /**
-     * Field _nsPrefix.
-     */
-    private java.lang.String _nsPrefix;
-
-    /**
-     * Field _nsURI.
-     */
-    private java.lang.String _nsURI;
-
-    /**
-     * Field _xmlName.
-     */
-    private java.lang.String _xmlName;
-
-
-      //----------------/
-     //- Constructors -/
-    //----------------/
-
-    public JalviewModelSequenceDescriptor() {
-        super();
-        _nsURI = "www.jalview.org";
-        _elementDefinition = false;
-        
-        //-- set grouping compositor
-        setCompositorAsSequence();
-        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
-        org.exolab.castor.mapping.FieldHandler             handler        = null;
-        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
-        //-- initialize attribute descriptors
-        
-        //-- initialize element descriptors
-        
-        //-- _JSeqList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JSeq.class, "_JSeqList", "JSeq", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getJSeq();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.addJSeq( (jalview.schemabinding.version2.JSeq) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.removeAllJSeq();
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.JSeq();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _JSeqList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
+public class JalviewModelSequenceDescriptor extends
+        org.exolab.castor.xml.util.XMLClassDescriptorImpl
+{
+
+  // --------------------------/
+  // - Class/Member Variables -/
+  // --------------------------/
+
+  /**
+   * Field _elementDefinition.
+   */
+  private boolean _elementDefinition;
+
+  /**
+   * Field _nsPrefix.
+   */
+  private java.lang.String _nsPrefix;
+
+  /**
+   * Field _nsURI.
+   */
+  private java.lang.String _nsURI;
+
+  /**
+   * Field _xmlName.
+   */
+  private java.lang.String _xmlName;
+
+  // ----------------/
+  // - Constructors -/
+  // ----------------/
+
+  public JalviewModelSequenceDescriptor()
+  {
+    super();
+    _nsURI = "www.jalview.org";
+    _elementDefinition = false;
+
+    // -- set grouping compositor
+    setCompositorAsSequence();
+    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
+    org.exolab.castor.mapping.FieldHandler handler = null;
+    org.exolab.castor.xml.FieldValidator fieldValidator = null;
+    // -- initialize attribute descriptors
+
+    // -- initialize element descriptors
+
+    // -- _JSeqList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.JSeq.class, "_JSeqList", "JSeq",
+            org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getJSeq();
+      }
+
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.addJSeq((jalview.schemabinding.version2.JSeq) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
-        //-- _JGroupList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JGroup.class, "_JGroupList", "JGroup", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getJGroup();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.addJGroup( (jalview.schemabinding.version2.JGroup) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.removeAllJGroup();
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.JGroup();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _JGroupList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
+      }
+
+      public void resetValue(Object object) throws IllegalStateException,
+              IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.removeAllJSeq();
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
-        //-- _viewportList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Viewport.class, "_viewportList", "Viewport", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getViewport();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.addViewport( (jalview.schemabinding.version2.Viewport) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.removeAllViewport();
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.Viewport();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _viewportList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
+      }
+
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.JSeq();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
+
+    // -- validation code for: _JSeqList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { // -- local scope
+    }
+    desc.setValidator(fieldValidator);
+    // -- _JGroupList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.JGroup.class, "_JGroupList",
+            "JGroup", org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getJGroup();
+      }
+
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.addJGroup((jalview.schemabinding.version2.JGroup) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
-        //-- _userColoursList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.UserColours.class, "_userColoursList", "UserColours", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getUserColours();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.addUserColours( (jalview.schemabinding.version2.UserColours) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.removeAllUserColours();
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.UserColours();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _userColoursList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
+      }
+
+      public void resetValue(Object object) throws IllegalStateException,
+              IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.removeAllJGroup();
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
-        //-- _treeList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Tree.class, "_treeList", "tree", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getTree();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.addTree( (jalview.schemabinding.version2.Tree) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.removeAllTree();
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.Tree();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _treeList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
+      }
+
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.JGroup();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
+
+    // -- validation code for: _JGroupList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { // -- local scope
+    }
+    desc.setValidator(fieldValidator);
+    // -- _viewportList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.Viewport.class, "_viewportList",
+            "Viewport", org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getViewport();
+      }
+
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.addViewport((jalview.schemabinding.version2.Viewport) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
-        //-- _featureSettings
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.FeatureSettings.class, "_featureSettings", "FeatureSettings", org.exolab.castor.xml.NodeType.Element);
-        handler = new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                JalviewModelSequence target = (JalviewModelSequence) object;
-                return target.getFeatureSettings();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    JalviewModelSequence target = (JalviewModelSequence) object;
-                    target.setFeatureSettings( (jalview.schemabinding.version2.FeatureSettings) value);
-                } catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance(java.lang.Object parent) {
-                return new jalview.schemabinding.version2.FeatureSettings();
-            }
-        };
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.jalview.org");
-        desc.setMultivalued(false);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _featureSettings
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        { //-- local scope
+      }
+
+      public void resetValue(Object object) throws IllegalStateException,
+              IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.removeAllViewport();
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
         }
-        desc.setValidator(fieldValidator);
+      }
+
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.Viewport();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
+
+    // -- validation code for: _viewportList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { // -- local scope
     }
+    desc.setValidator(fieldValidator);
+    // -- _userColoursList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.UserColours.class,
+            "_userColoursList", "UserColours",
+            org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getUserColours();
+      }
 
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.addUserColours((jalview.schemabinding.version2.UserColours) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
 
-      //-----------/
-     //- Methods -/
-    //-----------/
+      public void resetValue(Object object) throws IllegalStateException,
+              IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.removeAllUserColours();
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
 
-    /**
-     * Method getAccessMode.
-     * 
-     * @return the access mode specified for this class.
-     */
-    public org.exolab.castor.mapping.AccessMode getAccessMode(
-    ) {
-        return null;
-    }
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.UserColours();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
 
-    /**
-     * Method getIdentity.
-     * 
-     * @return the identity field, null if this class has no
-     * identity.
-     */
-    public org.exolab.castor.mapping.FieldDescriptor getIdentity(
-    ) {
-        return super.getIdentity();
+    // -- validation code for: _userColoursList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { // -- local scope
     }
+    desc.setValidator(fieldValidator);
+    // -- _treeList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.Tree.class, "_treeList", "tree",
+            org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getTree();
+      }
 
-    /**
-     * Method getJavaClass.
-     * 
-     * @return the Java class represented by this descriptor.
-     */
-    public java.lang.Class getJavaClass(
-    ) {
-        return jalview.schemabinding.version2.JalviewModelSequence.class;
-    }
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.addTree((jalview.schemabinding.version2.Tree) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
 
-    /**
-     * Method getNameSpacePrefix.
-     * 
-     * @return the namespace prefix to use when marshaling as XML.
-     */
-    public java.lang.String getNameSpacePrefix(
-    ) {
-        return _nsPrefix;
-    }
+      public void resetValue(Object object) throws IllegalStateException,
+              IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.removeAllTree();
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
 
-    /**
-     * Method getNameSpaceURI.
-     * 
-     * @return the namespace URI used when marshaling and
-     * unmarshaling as XML.
-     */
-    public java.lang.String getNameSpaceURI(
-    ) {
-        return _nsURI;
-    }
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.Tree();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
 
-    /**
-     * Method getValidator.
-     * 
-     * @return a specific validator for the class described by this
-     * ClassDescriptor.
-     */
-    public org.exolab.castor.xml.TypeValidator getValidator(
-    ) {
-        return this;
+    // -- validation code for: _treeList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { // -- local scope
     }
+    desc.setValidator(fieldValidator);
+    // -- _featureSettings
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
+            jalview.schemabinding.version2.FeatureSettings.class,
+            "_featureSettings", "FeatureSettings",
+            org.exolab.castor.xml.NodeType.Element);
+    handler = new org.exolab.castor.xml.XMLFieldHandler()
+    {
+      public java.lang.Object getValue(java.lang.Object object)
+              throws IllegalStateException
+      {
+        JalviewModelSequence target = (JalviewModelSequence) object;
+        return target.getFeatureSettings();
+      }
 
-    /**
-     * Method getXMLName.
-     * 
-     * @return the XML Name for the Class being described.
-     */
-    public java.lang.String getXMLName(
-    ) {
-        return _xmlName;
-    }
+      public void setValue(java.lang.Object object, java.lang.Object value)
+              throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          JalviewModelSequence target = (JalviewModelSequence) object;
+          target.setFeatureSettings((jalview.schemabinding.version2.FeatureSettings) value);
+        } catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
+
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.FeatureSettings();
+      }
+    };
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.jalview.org");
+    desc.setMultivalued(false);
+    addFieldDescriptor(desc);
 
-    /**
-     * Method isElementDefinition.
-     * 
-     * @return true if XML schema definition of this Class is that
-     * of a global
-     * element or element with anonymous type definition.
-     */
-    public boolean isElementDefinition(
-    ) {
-        return _elementDefinition;
+    // -- validation code for: _featureSettings
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    { // -- local scope
     }
+    desc.setValidator(fieldValidator);
+  }
+
+  // -----------/
+  // - Methods -/
+  // -----------/
+
+  /**
+   * Method getAccessMode.
+   * 
+   * @return the access mode specified for this class.
+   */
+  public org.exolab.castor.mapping.AccessMode getAccessMode()
+  {
+    return null;
+  }
+
+  /**
+   * Method getIdentity.
+   * 
+   * @return the identity field, null if this class has no identity.
+   */
+  public org.exolab.castor.mapping.FieldDescriptor getIdentity()
+  {
+    return super.getIdentity();
+  }
+
+  /**
+   * Method getJavaClass.
+   * 
+   * @return the Java class represented by this descriptor.
+   */
+  public java.lang.Class getJavaClass()
+  {
+    return jalview.schemabinding.version2.JalviewModelSequence.class;
+  }
+
+  /**
+   * Method getNameSpacePrefix.
+   * 
+   * @return the namespace prefix to use when marshaling as XML.
+   */
+  public java.lang.String getNameSpacePrefix()
+  {
+    return _nsPrefix;
+  }
+
+  /**
+   * Method getNameSpaceURI.
+   * 
+   * @return the namespace URI used when marshaling and unmarshaling as XML.
+   */
+  public java.lang.String getNameSpaceURI()
+  {
+    return _nsURI;
+  }
+
+  /**
+   * Method getValidator.
+   * 
+   * @return a specific validator for the class described by this
+   *         ClassDescriptor.
+   */
+  public org.exolab.castor.xml.TypeValidator getValidator()
+  {
+    return this;
+  }
+
+  /**
+   * Method getXMLName.
+   * 
+   * @return the XML Name for the Class being described.
+   */
+  public java.lang.String getXMLName()
+  {
+    return _xmlName;
+  }
+
+  /**
+   * Method isElementDefinition.
+   * 
+   * @return true if XML schema definition of this Class is that of a global
+   *         element or element with anonymous type definition.
+   */
+  public boolean isElementDefinition()
+  {
+    return _elementDefinition;
+  }
 
 }