X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FAnnotationColourGradient.java;fp=src%2Fjalview%2Fschemes%2FAnnotationColourGradient.java;h=b0365cebeb5e56f2056107af13d1bfb51bdb2be9;hb=863467bf6c59c0bc5368c8f3a03d9d5a4f10700d;hp=5d12cce632a9ac5036db95393a301a220606cc40;hpb=b65e8427808280faf920f306f7f0e5a71a9ff6bf;p=jalview.git

diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java
index 5d12cce..b0365ce 100755
--- a/src/jalview/schemes/AnnotationColourGradient.java
+++ b/src/jalview/schemes/AnnotationColourGradient.java
@@ -19,6 +19,7 @@ package jalview.schemes;
 
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.GraphLine;
+import jalview.datamodel.SequenceI;
 
 import java.awt.Color;
 
@@ -154,7 +155,7 @@ public class AnnotationColourGradient extends ResidueColourScheme
    * @return DOCUMENT ME!
    */
   @Override
-  public Color findColour(char c, int j, int sequenceIndex)
+  public Color findColour(char c, int j, SequenceI seq)
   {
     Color currentColour = Color.white;
 
@@ -204,7 +205,7 @@ public class AnnotationColourGradient extends ResidueColourScheme
 
           if (colourScheme != null)
           {
-            currentColour = colourScheme.findColour(c, j, sequenceIndex);
+            currentColour = colourScheme.findColour(c, j, seq);
           }
           else if (range != 0)
           {