X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FPIDColourScheme.java;fp=src%2Fjalview%2Fschemes%2FPIDColourScheme.java;h=657d6b0dc49a6771cd1f6f0a4449d3a4a240f022;hb=9eabd6dffd6d19b2826b887a5def80351b9bceed;hp=f213abecf18b6bf8192d60d254a24a144dbf3249;hpb=9debcac658224e1a84ddff4c4fd9f696e812913f;p=jalview.git

diff --git a/src/jalview/schemes/PIDColourScheme.java b/src/jalview/schemes/PIDColourScheme.java
index f213abe..657d6b0 100755
--- a/src/jalview/schemes/PIDColourScheme.java
+++ b/src/jalview/schemes/PIDColourScheme.java
@@ -47,10 +47,9 @@ public class PIDColourScheme extends ResidueColourScheme
           String consensusResidue, float pid)
   {
     /*
-     * make everything uppercase; note this does nothing
-     * if consensusResidue is already uppercase
+     * compare as upper case; note consensusResidue is 
+     * always computed as uppercase
      */
-    consensusResidue = consensusResidue.toUpperCase();
     if ('a' <= c && c <= 'z')
     {
       c -= ('a' - 'A');