X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fstructures%2Fmodels%2FAAStructureBindingModel.java;fp=src%2Fjalview%2Fstructures%2Fmodels%2FAAStructureBindingModel.java;h=a98e4b1b579dc4c3e404d28072f5b0d10d45bb1b;hb=a83adb45bdf9554e270921b4baad94defd314b36;hp=252828601a738b6ebe153b142f60d438cf2b3e7c;hpb=d4ec118f86b5c9dee801e743c46aaacc7bb521d1;p=jalview.git diff --git a/src/jalview/structures/models/AAStructureBindingModel.java b/src/jalview/structures/models/AAStructureBindingModel.java index 2528286..a98e4b1 100644 --- a/src/jalview/structures/models/AAStructureBindingModel.java +++ b/src/jalview/structures/models/AAStructureBindingModel.java @@ -355,8 +355,8 @@ public abstract class AAStructureBindingModel { Integer.valueOf(pe).toString() })); } final String nullChain = "TheNullChain"; - List s = new ArrayList(); - List c = new ArrayList(); + List s = new ArrayList<>(); + List c = new ArrayList<>(); if (getChains() == null) { setChains(new String[getPdbCount()][]); @@ -425,8 +425,8 @@ public abstract class AAStructureBindingModel public synchronized PDBEntry[] addSequenceAndChain(PDBEntry[] pdbe, SequenceI[][] seq, String[][] chns) { - List v = new ArrayList(); - List rtn = new ArrayList(); + List v = new ArrayList<>(); + List rtn = new ArrayList<>(); for (int i = 0; i < getPdbCount(); i++) { v.add(getPdbEntry(i)); @@ -512,12 +512,10 @@ public abstract class AAStructureBindingModel } /** - * Returns a readable description of all mappings for the wrapped pdbfile to - * any mapped sequences * - * @param pdbfile - * @param seqs - * @return + * @return a readable description of all mappings for the wrapped pdbfile to + * any mapped sequences + * */ public String printMappings() {