X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Furls%2FIdentifiersUrlProvider.java;fp=src%2Fjalview%2Furls%2FIdentifiersUrlProvider.java;h=850a2308c6d8692fe8d441f85e57528e604984f0;hb=9c98d4bd666346f6ad3892c5394b7da3be82d93e;hp=07eb23efc9211dd3054b79a1818dc317a6fcaa9a;hpb=c7b2143c9cf7c5e05ad63251f7d3910751b16d20;p=jalview.git

diff --git a/src/jalview/urls/IdentifiersUrlProvider.java b/src/jalview/urls/IdentifiersUrlProvider.java
index 07eb23e..850a230 100644
--- a/src/jalview/urls/IdentifiersUrlProvider.java
+++ b/src/jalview/urls/IdentifiersUrlProvider.java
@@ -75,7 +75,7 @@ public class IdentifiersUrlProvider extends UrlProviderImpl
    * @return hashmap of identifiers.org data, keyed by MIRIAM id
    */
   @SuppressWarnings("unchecked")
-private HashMap<String, UrlLink> readIdentifiers(String idFileName)
+  private HashMap<String, UrlLink> readIdentifiers(String idFileName)
   {
     // identifiers.org data
     HashMap<String, UrlLink> idData = new HashMap<>();
@@ -83,11 +83,12 @@ private HashMap<String, UrlLink> readIdentifiers(String idFileName)
     String errorMessage = null;
     try
     {
-    	// NOTE: THIS WILL FAIL IN SWINGJS BECAUSE IT INVOLVES A FILE READER
-    
+      // NOTE: THIS WILL FAIL IN SWINGJS BECAUSE IT INVOLVES A FILE READER
+
       FileReader reader = new FileReader(idFileName);
       String key = "";
-      Map<String, Object> obj = (Map<String, Object>) JSONUtils.parse(reader);
+      Map<String, Object> obj = (Map<String, Object>) JSONUtils
+              .parse(reader);
       if (obj.containsKey(ID_ORG_KEY))
       {
         key = ID_ORG_KEY;
@@ -119,9 +120,11 @@ private HashMap<String, UrlLink> readIdentifiers(String idFileName)
     } catch (IOException | ParseException e)
     {
       // unnecessary e.printStackTrace();
-      // Note how in JavaScript we can grab the first bytes from any file reader. 
+      // Note how in JavaScript we can grab the first bytes from any file
+      // reader.
       // Typical report here is "NetworkError" because the file does not exist.
-      // "https://." is coming from System.getProperty("user.home"), but this could
+      // "https://." is coming from System.getProperty("user.home"), but this
+      // could
       // be set by the page developer to anything, of course.
       errorMessage = e.toString();
       idData.clear();
@@ -129,7 +132,8 @@ private HashMap<String, UrlLink> readIdentifiers(String idFileName)
     // BH 2018 -- added more valuable report
     if (errorMessage != null)
     {
-      System.err.println("IdentifiersUrlProvider: cannot read " + idFileName + ": " + errorMessage);
+      System.err.println("IdentifiersUrlProvider: cannot read " + idFileName
+              + ": " + errorMessage);
     }
     return idData;
   }