X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Futil%2FDBRefUtils.java;h=94bc5da5b471315224b2d57477dea24d612dda70;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=123a4e104759d438d43433d65cca3425d5545fe9;hpb=bc27e1b604af729b363da1f29bdd5774ca79f4e4;p=jalview.git

diff --git a/src/jalview/util/DBRefUtils.java b/src/jalview/util/DBRefUtils.java
index 123a4e1..94bc5da 100755
--- a/src/jalview/util/DBRefUtils.java
+++ b/src/jalview/util/DBRefUtils.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -118,8 +118,7 @@ public class DBRefUtils
     {
       return false;
     }
-    String coordsys = dasCoordinateSystemsLookup.get(string
-            .toLowerCase());
+    String coordsys = dasCoordinateSystemsLookup.get(string.toLowerCase());
     return coordsys == null ? false : coordsys.equals(dBRefEntry
             .getSource());
   }
@@ -139,8 +138,7 @@ public class DBRefUtils
     {
       return null;
     }
-    String canonical = canonicalSourceNameLookup.get(source
-            .toLowerCase());
+    String canonical = canonicalSourceNameLookup.get(source.toLowerCase());
     return canonical == null ? source : canonical;
   }
 
@@ -436,7 +434,7 @@ public class DBRefUtils
         {
           String pdbid = r.stringMatched(1);
           String chaincode = r.stringMatched(2);
-          if (chaincode==null)
+          if (chaincode == null)
           {
             chaincode = " ";
           }
@@ -455,8 +453,10 @@ public class DBRefUtils
           pdbr.setChainCode(chaincode);
           // pdbr.getProperty().put("CHAIN", chaincode);
           seq.addPDBId(pdbr);
-        } else {
-          System.err.println("Malformed PDB DR line:"+acn);
+        }
+        else
+        {
+          System.err.println("Malformed PDB DR line:" + acn);
         }
       }
       else