X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2Fseqfeatures%2FFeatureRendererSettings.java;fp=src%2Fjalview%2Fviewmodel%2Fseqfeatures%2FFeatureRendererSettings.java;h=cd6f51b11f27f1b90f69d36b17535938af92bd73;hb=30b23d19ad4985ef3cdaf5f54936f5c48b31251d;hp=02b7f353a6efc808c02adedb30ae527371bd42b4;hpb=48eb1017c54d7c82a53dde15788371eb086b16bd;p=jalview.git

diff --git a/src/jalview/viewmodel/seqfeatures/FeatureRendererSettings.java b/src/jalview/viewmodel/seqfeatures/FeatureRendererSettings.java
index 02b7f35..cd6f51b 100644
--- a/src/jalview/viewmodel/seqfeatures/FeatureRendererSettings.java
+++ b/src/jalview/viewmodel/seqfeatures/FeatureRendererSettings.java
@@ -41,7 +41,7 @@ import java.util.concurrent.ConcurrentHashMap;
  * </ul>
  * Note that feature type visibility settings are not held here.
  */
-public class FeatureRendererSettings implements Cloneable
+public class FeatureRendererSettings
 {
   String[] renderOrder;
 
@@ -64,10 +64,21 @@ public class FeatureRendererSettings implements Cloneable
 
   Map<String, Float> featureOrder;
 
+  /**
+   * Constructor
+   * 
+   * @param renderOrder
+   * @param featureGroups
+   * @param featureColours
+   * @param transparency
+   * @param featureOrder
+   * @param filters
+   */
   public FeatureRendererSettings(String[] renderOrder,
           Map<String, Boolean> featureGroups,
           Map<String, FeatureColourI> featureColours, float transparency,
-          Map<String, Float> featureOrder)
+          Map<String, Float> featureOrder,
+          Map<String, FeatureMatcherSetI> filters)
   {
     super();
     this.renderOrder = Arrays.copyOf(renderOrder, renderOrder.length);
@@ -77,6 +88,7 @@ public class FeatureRendererSettings implements Cloneable
             featureColours);
     this.transparency = transparency;
     this.featureOrder = new ConcurrentHashMap<>(featureOrder);
+    featureFilters = filters;
   }
 
   /**