X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fworkers%2FAnnotationWorker.java;fp=src%2Fjalview%2Fworkers%2FAnnotationWorker.java;h=8f37f15e7377bba0153d42203846bee11bab188c;hb=4687e1243f51bd09334792b8a7ce518a5aa07de7;hp=8569039f6323219a2c0d480ea63a0c56706643cf;hpb=7e441a4a9594821ec56539b29cb3b8a13bfa3c65;p=jalview.git

diff --git a/src/jalview/workers/AnnotationWorker.java b/src/jalview/workers/AnnotationWorker.java
index 8569039..8f37f15 100644
--- a/src/jalview/workers/AnnotationWorker.java
+++ b/src/jalview/workers/AnnotationWorker.java
@@ -51,7 +51,7 @@ class AnnotationWorker extends AlignCalcWorker
           AnnotationProviderI counter)
   {
     super(viewport, panel);
-    ourAnnots = new ArrayList<AlignmentAnnotation>();
+    ourAnnots = new ArrayList<>();
     this.counter = counter;
     calcMan.registerWorker(this);
   }
@@ -121,7 +121,10 @@ class AnnotationWorker extends AlignCalcWorker
     if (ap != null)
     {
       ap.adjustAnnotationHeight();
-      ap.paintAlignment(true);
+      // TODO: only need to update colour and geometry if panel height changes
+      // and view is coloured by annotation, and the annotation is actually
+      // changed!
+      ap.paintAlignment(true, true);
     }
   }