X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FDBRefFetcher.java;h=a2526a944df0e83999a2ea8a741244586067bed9;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=03632c89db3387bc16e3359a99741bdeb76bc7b2;hpb=d3cb4999ba0f3a1b58b3f17277ea216f67da7d9f;p=jalview.git diff --git a/src/jalview/ws/DBRefFetcher.java b/src/jalview/ws/DBRefFetcher.java index 03632c8..a2526a9 100644 --- a/src/jalview/ws/DBRefFetcher.java +++ b/src/jalview/ws/DBRefFetcher.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) - * Copyright (C) $$Year-Rel$$ The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -622,11 +622,10 @@ public class DBRefFetcher implements Runnable // absStart = 0; // create valid mapping between matching region of local sequence and // the mapped sequence - mp = new Mapping(null, new int[] { - sequenceStart + absStart, - sequenceStart + absStart + entrySeq.length() - 1 }, - new int[] { entry.getStart(), - entry.getStart() + entrySeq.length() - 1 }, 1, 1); + mp = new Mapping(null, new int[] { sequenceStart + absStart, + sequenceStart + absStart + entrySeq.length() - 1 }, new int[] + { entry.getStart(), entry.getStart() + entrySeq.length() - 1 }, + 1, 1); updateRefFrame = false; // mapping is based on current start/end so // don't modify start and end }