X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fdbsources%2FEmblFlatfileSource.java;fp=src%2Fjalview%2Fws%2Fdbsources%2FEmblFlatfileSource.java;h=6536958ba9bdfb66f61691cf3d2ba89aba9e6522;hb=049cfa5fc078e6daac6158f25cea7d9a60b48969;hp=2353f22066727ad77d20e6a55c085839f822d63a;hpb=84478e43fc8694f4c0c4c16515faf813744194da;p=jalview.git

diff --git a/src/jalview/ws/dbsources/EmblFlatfileSource.java b/src/jalview/ws/dbsources/EmblFlatfileSource.java
index 2353f22..6536958 100644
--- a/src/jalview/ws/dbsources/EmblFlatfileSource.java
+++ b/src/jalview/ws/dbsources/EmblFlatfileSource.java
@@ -73,12 +73,12 @@ public abstract class EmblFlatfileSource extends EbiFileRetrievedProxy
     try
     {
       reply = dbFetch.fetchDataAsFile(
-              dbName.toLowerCase() + ":" + query.trim(), null, "txt");
+              dbName.toLowerCase() + ":" + query.trim(), null, "gz");
     } catch (Exception e)
     {
       stopQuery();
       throw new Exception(
-              String.format("EBI EMBL XML retrieval failed for %s:%s",
+              String.format("EBI EMBL retrieval failed for %s:%s",
                       dbName.toLowerCase(), query.trim()),
               e);
     }
@@ -112,4 +112,10 @@ public abstract class EmblFlatfileSource extends EbiFileRetrievedProxy
     stopQuery();
     return al;
   }
+
+  @Override
+  public boolean isDnaCoding()
+  {
+    return true;
+  }
 }