X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws1%2FDiscoverer.java;fp=src%2Fjalview%2Fws%2Fjws1%2FDiscoverer.java;h=4a8f512e563c31054a551f346d570b8f306d020d;hb=cb8e52fbbc5f725e3f7f48c672cdddb0690bd978;hp=9f11064170c63b9e58c9a64bdee2ff87dfce7a78;hpb=1c721468246c2aafd86fc52d954512374f576b11;p=jalview.git

diff --git a/src/jalview/ws/jws1/Discoverer.java b/src/jalview/ws/jws1/Discoverer.java
index 9f11064..4a8f512 100644
--- a/src/jalview/ws/jws1/Discoverer.java
+++ b/src/jalview/ws/jws1/Discoverer.java
@@ -21,6 +21,7 @@
 package jalview.ws.jws1;
 
 import jalview.bin.Cache;
+import jalview.bin.Console;
 import jalview.gui.JvOptionPane;
 import jalview.util.MessageManager;
 
@@ -99,7 +100,7 @@ public class Discoverer implements Runnable
       // timeout
     } catch (Exception ex)
     {
-      Cache.error(
+      Console.error(
               "Serious!  Service location failed\nfor URL :" + WsURL + "\n",
               ex);
 
@@ -145,21 +146,21 @@ public class Discoverer implements Runnable
           }
           else
           {
-            Cache.info("Ignoring duplicate url in DISCOVERY_URLS list");
+            Console.info("Ignoring duplicate url in DISCOVERY_URLS list");
           }
         } catch (Exception ex)
         {
-          Cache.warn("Problem whilst trying to make a URL from '"
+          Console.warn("Problem whilst trying to make a URL from '"
                           + ((url != null) ? url : "<null>") + "'");
-          Cache.warn(
+          Console.warn(
                   "This was probably due to a malformed comma separated list"
                           + " in the DISCOVERY_URLS entry of $(HOME)/.jalview_properties)");
-          Cache.debug("Exception was ", ex);
+          Console.debug("Exception was ", ex);
         }
       }
     } catch (Exception ex)
     {
-      Cache.warn(
+      Console.warn(
               "Error parsing comma separated list of urls in DISCOVERY_URLS.",
               ex);
     }
@@ -175,7 +176,7 @@ public class Discoverer implements Runnable
    */
   static public void doDiscovery()
   {
-    Cache.debug("(Re)-Initialising the discovery URL list.");
+    Console.debug("(Re)-Initialising the discovery URL list.");
     try
     {
       reallyDiscoverServices = Cache
@@ -186,7 +187,7 @@ public class Discoverer implements Runnable
       }
       else
       {
-        Cache.debug("Setting default services");
+        Console.debug("Setting default services");
         services = new Hashtable<>();
         // Muscle, Clustal and JPred.
         ServiceHandle[] defServices = { new ServiceHandle("MsaWS",
@@ -237,7 +238,7 @@ public class Discoverer implements Runnable
     ServiceHandles shs = null;
     try
     {
-      Cache.debug("Discovering services using " + location);
+      Console.debug("Discovering services using " + location);
       shs = locateWebService(location).getServices();
     } catch (org.apache.axis.AxisFault f)
     {
@@ -255,13 +256,13 @@ public class Discoverer implements Runnable
       }
       else
       {
-        Cache.warn("No Discovery service at " + location);
-        Cache.debug("Axis Fault", f);
+        Console.warn("No Discovery service at " + location);
+        Console.debug("Axis Fault", f);
       }
     } catch (Exception e)
     {
-      Cache.warn("No Discovery service at " + location);
-      Cache.debug("Discovery Service General Exception", e);
+      Console.warn("No Discovery service at " + location);
+      Console.debug("Discovery Service General Exception", e);
     }
     if ((shs != null) && shs.getServices().length > 0)
     {
@@ -291,7 +292,7 @@ public class Discoverer implements Runnable
     {
       if (!cat.contains(sh[i]))
       {
-        Cache.debug("A " + sh[i].getAbstractName()
+        Console.debug("A " + sh[i].getAbstractName()
                 + " service called " + sh[i].getName() + " exists at "
                 + sh[i].getEndpointURL() + "\n");
         if (!sscat.containsKey(sh[i].getAbstractName()))
@@ -313,14 +314,14 @@ public class Discoverer implements Runnable
               disc_serv = new java.net.URL(sh[i].getEndpointURL());
               if (!ServiceURLList.contains(disc_serv))
               {
-                Cache.debug(
+                Console.debug(
                         "Adding new discovery service at " + disc_serv);
                 ServiceURLList.add(disc_serv);
                 seenNewDiscovery = true;
               }
             } catch (Exception e)
             {
-              Cache.debug("Ignoring bad discovery service URL "
+              Console.debug("Ignoring bad discovery service URL "
                               + sh[i].getEndpointURL(), e);
             }
           }
@@ -338,7 +339,7 @@ public class Discoverer implements Runnable
     int s_url = 0;
     if (ServiceURLList == null)
     {
-      Cache.debug("No service endpoints to use for service discovery.");
+      Console.debug("No service endpoints to use for service discovery.");
       return;
     }
     while (s_url < ServiceURLList.size())
@@ -351,7 +352,7 @@ public class Discoverer implements Runnable
       }
       else
       {
-        Cache.warn("No services at "
+        Console.warn("No services at "
                 + (ServiceURLList.get(s_url))
                 + " - check DISCOVERY_URLS property in .jalview_properties");
       }