X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws1%2FJPredClient.java;h=8fff195e84c72f7038543e4035e96aa1330e0e71;hb=8a6fa9ea9900d0f106529c3f6283e7f9d76dd2cb;hp=846cd2943d3e95dd2d8308b0f7cd4b92e860c119;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git

diff --git a/src/jalview/ws/jws1/JPredClient.java b/src/jalview/ws/jws1/JPredClient.java
index 846cd29..8fff195 100644
--- a/src/jalview/ws/jws1/JPredClient.java
+++ b/src/jalview/ws/jws1/JPredClient.java
@@ -252,15 +252,9 @@ public class JPredClient extends WS1Client
     String altitle = "JNet prediction on " + seq.getName()
             + " using alignment from " + title;
 
-    wsInfo
-            .setProgressText("Job details for MSA based prediction ("
-                    + title
-                    + ") on sequence :\n>"
-                    + seq.getName()
-                    + "\n"
-                    + AlignSeq
-                            .extractGaps("-. ", seq.getSequenceAsString())
-                    + "\n");
+    wsInfo.setProgressText("Job details for MSA based prediction (" + title
+            + ") on sequence :\n>" + seq.getName() + "\n"
+            + AlignSeq.extractGaps("-. ", seq.getSequenceAsString()) + "\n");
     SequenceI aln[] = new SequenceI[msf.length];
     for (int i = 0, j = msf.length; i < j; i++)
     {
@@ -289,13 +283,9 @@ public class JPredClient extends WS1Client
     {
       wsInfo = setWebService();
     }
-    wsInfo
-            .setProgressText("Job details for prediction on sequence :\n>"
-                    + seq.getName()
-                    + "\n"
-                    + AlignSeq
-                            .extractGaps("-. ", seq.getSequenceAsString())
-                    + "\n");
+    wsInfo.setProgressText("Job details for prediction on sequence :\n>"
+            + seq.getName() + "\n"
+            + AlignSeq.extractGaps("-. ", seq.getSequenceAsString()) + "\n");
     String altitle = "JNet prediction for sequence " + seq.getName()
             + " from " + title;
 
@@ -371,16 +361,16 @@ public class JPredClient extends WS1Client
         if (msa.getSequences().length == 1)
         {
           // Single Sequence prediction
-          new jalview.ws.jws1.JPredClient(sh, af.getTitle(), false, msa, af,
-                  true);
+          new jalview.ws.jws1.JPredClient(sh, af.getTitle(), false, msa,
+                  af, true);
         }
         else
         {
           if (msa.getSequences().length > 1)
           {
             // Sequence profile based prediction
-            new jalview.ws.jws1.JPredClient(sh, af.getTitle(), true, msa, af,
-                    true);
+            new jalview.ws.jws1.JPredClient(sh, af.getTitle(), true, msa,
+                    af, true);
           }
         }
       }