X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FAAConClient.java;h=327864adb9a1d562c4029f764c985331244a8c50;hb=3a421a814ca73cf95eeb0d9450dc2178b15ffa46;hp=3594aa42ab3277c3231dd0d7fc333fb54344c7b2;hpb=4decc3e365ce990f54773d24bb9583df48d2797a;p=jalview.git diff --git a/src/jalview/ws/jws2/AAConClient.java b/src/jalview/ws/jws2/AAConClient.java index 3594aa4..327864a 100644 --- a/src/jalview/ws/jws2/AAConClient.java +++ b/src/jalview/ws/jws2/AAConClient.java @@ -53,6 +53,7 @@ public class AAConClient extends JabawsCalcWorker initViewportParams(); } + @Override public String getServiceActionText() { return "calculating Amino acid consensus using AACon service"; @@ -63,13 +64,14 @@ public class AAConClient extends JabawsCalcWorker * current visualization settings. */ + @Override public void updateResultAnnotation(boolean immediate) { if (immediate || !calcMan.isWorking(this) && scoremanager != null) { Map> scoremap = scoremanager.asMap(); int alWidth = alignViewport.getAlignment().getWidth(); - ArrayList ourAnnot = new ArrayList(); + ArrayList ourAnnot = new ArrayList<>(); for (String score : scoremap.keySet()) { Set scores = scoremap.get(score);