X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Frest%2Fparams%2FSeqVector.java;h=5cf15e1a69bbac9fafed32004b774ba784cf8ee4;hb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;hp=f890add45078d600f46bea8b11242c95d46da85c;hpb=b57a02c25e335d033c97f8a6bacd6b54f62bd2b6;p=jalview.git diff --git a/src/jalview/ws/rest/params/SeqVector.java b/src/jalview/ws/rest/params/SeqVector.java index f890add..5cf15e1 100644 --- a/src/jalview/ws/rest/params/SeqVector.java +++ b/src/jalview/ws/rest/params/SeqVector.java @@ -1,20 +1,23 @@ -/******************************************************************************* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle - * +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) + * Copyright (C) 2015 The Jalview Authors + * * This file is part of Jalview. - * + * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . - *******************************************************************************/ + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.ws.rest.params; import jalview.datamodel.AlignmentI; @@ -24,8 +27,6 @@ import jalview.ws.params.simple.Option; import jalview.ws.rest.InputType; import jalview.ws.rest.NoValidInputDataException; import jalview.ws.rest.RestJob; -import jalview.ws.rest.RestServiceDescription; -import jalview.ws.rest.InputType.molType; import java.io.UnsupportedEncodingException; import java.util.ArrayList; @@ -34,7 +35,6 @@ import java.util.List; import org.apache.http.entity.mime.content.ContentBody; import org.apache.http.entity.mime.content.StringBody; -import org.jmol.util.ArrayUtil; /** * input a list of sequences separated by some separator @@ -50,8 +50,7 @@ public class SeqVector extends InputType public SeqVector() { - super(new Class[] - { AlignmentI.class }); + super(new Class[] { AlignmentI.class }); } @Override @@ -126,12 +125,12 @@ public class SeqVector extends InputType List lst = getBaseOptions(); lst.add(new Option("sep", "Separator character between elements of vector", true, ",", - sep, Arrays.asList(new String[] - { " ", ",", ";", "\t", "|" }), null)); + sep, Arrays.asList(new String[] { " ", ",", ";", "\t", "|" }), + null)); lst.add(createMolTypeOption("type", "Sequence type", false, type, molType.MIX)); return lst; } -} \ No newline at end of file +}