X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fseqfetcher%2FDbSourceProxyImpl.java;fp=src%2Fjalview%2Fws%2Fseqfetcher%2FDbSourceProxyImpl.java;h=2fcf501fbac7974081ff45da1e36a4d3036eb00c;hb=2595e9d4ee0dbbd3406a98c4e49a61ccde806479;hp=5bed7209772625e4ab6f29a60ba12ed5012a3eb5;hpb=e20075ba805d744d7cc4976e2b8d5e5840fb0a8d;p=jalview.git

diff --git a/src/jalview/ws/seqfetcher/DbSourceProxyImpl.java b/src/jalview/ws/seqfetcher/DbSourceProxyImpl.java
index 5bed720..2fcf501 100644
--- a/src/jalview/ws/seqfetcher/DbSourceProxyImpl.java
+++ b/src/jalview/ws/seqfetcher/DbSourceProxyImpl.java
@@ -22,6 +22,8 @@ package jalview.ws.seqfetcher;
 
 import jalview.api.FeatureSettingsModelI;
 import jalview.datamodel.AlignmentI;
+import jalview.io.DataSourceType;
+import jalview.io.FileFormatI;
 import jalview.io.FormatAdapter;
 import jalview.io.IdentifyFile;
 
@@ -92,10 +94,12 @@ public abstract class DbSourceProxyImpl implements DbSourceProxy
   protected AlignmentI parseResult(String result) throws Exception
   {
     AlignmentI sequences = null;
-    String format = new IdentifyFile().identify(result, "Paste");
-    if (FormatAdapter.isValidFormat(format))
+    FileFormatI format = new IdentifyFile().identify(result,
+            DataSourceType.PASTE);
+    if (format != null)
     {
-      sequences = new FormatAdapter().readFile(result.toString(), "Paste",
+      sequences = new FormatAdapter().readFile(result.toString(),
+              DataSourceType.PASTE,
               format);
     }
     return sequences;