X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fsifts%2FSiftsClient.java;fp=src%2Fjalview%2Fws%2Fsifts%2FSiftsClient.java;h=d2db9cf5b577e6e371d3b47de0876f67eac9f059;hb=3ebcd4e7139a1c0845d521610f470ab795026933;hp=68af7c3f570f36ca3b9ce35b39eb9ee9c89b57f0;hpb=c0dd3fb0563316f2387e2b9b89afd181176bbc33;p=jalview.git

diff --git a/src/jalview/ws/sifts/SiftsClient.java b/src/jalview/ws/sifts/SiftsClient.java
index 68af7c3..d2db9cf 100644
--- a/src/jalview/ws/sifts/SiftsClient.java
+++ b/src/jalview/ws/sifts/SiftsClient.java
@@ -413,6 +413,11 @@ public class SiftsClient implements SiftsClientI
   public StructureMapping getSiftsStructureMapping(SequenceI seq,
           String pdbFile, String chain) throws SiftsException
   {
+    SequenceI aseq = seq;
+    while (seq.getDatasetSequence() != null)
+    {
+      seq = seq.getDatasetSequence();
+    }
     structId = (chain == null) ? pdbId : pdbId + "|" + chain;
     System.out.println("Getting SIFTS mapping for " + structId + ": seq "
             + seq.getName());