X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fslivkaws%2FSlivkaJPredServiceInstance.java;h=3958198d5df6cc8eb31217d69560fcae3554a7db;hb=871ad3a9474c5f4fbbe896a8a0551d0a6250cb77;hp=462be2833b45259bd9d270d79f8b6353ea74ef61;hpb=eb6d7c560434c986f1dc76f6243d1493688f397e;p=jalview.git diff --git a/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java b/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java index 462be28..3958198 100644 --- a/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java +++ b/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java @@ -2,6 +2,7 @@ package jalview.ws.slivkaws; import java.io.IOError; import java.io.IOException; +import java.util.Collection; import java.util.List; import jalview.datamodel.AlignmentI; @@ -63,9 +64,10 @@ public class SlivkaJPredServiceInstance extends SlivkaWSInstance @Override public AlignmentI getAlignment(JobId jobId) throws Exception { - List files; + Collection files; try { - files = client.getJobResults(jobId.getJobId()); + var job = client.getJob(jobId.getJobId()); + files = job.getResults(); for (RemoteFile f : files) { var alignment = readAlignment(f); if (alignment != null) @@ -83,12 +85,12 @@ public class SlivkaJPredServiceInstance extends SlivkaWSInstance @Override public JPredFile getPrediction(JobId jobId) throws Exception { - List files = client.getJobResults(jobId.getJobId()); + Collection files = client.getJob(jobId.getJobId()).getResults(); for (RemoteFile f : files) { if (f.getLabel().equals("concise")) { - return new JPredFile(f.getURL(), DataSourceType.URL); + return new JPredFile(f.getContentUrl(), DataSourceType.URL); } } return null;