X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FCommentType.java;fp=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FCommentType.java;h=2227f187bdd5359c99480e4e6f1a813255c949f1;hb=7b32d373b60d0af55481cfd6d377b2cc1ec035c0;hp=9cc5164dc57e0cc060acc58ca642e4adea3d1451;hpb=1e591b1447109f90a7bb831b89b551243e61267c;p=jalview.git diff --git a/src/jalview/xml/binding/uniprot/CommentType.java b/src/jalview/xml/binding/uniprot/CommentType.java index 9cc5164..2227f18 100644 --- a/src/jalview/xml/binding/uniprot/CommentType.java +++ b/src/jalview/xml/binding/uniprot/CommentType.java @@ -1,8 +1,8 @@ // -// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 -// See http://java.sun.com/xml/jaxb +// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 +// See https://eclipse-ee4j.github.io/jaxb-ri // Any modifications to this file will be lost upon recompilation of the source schema. -// Generated on: 2019.04.05 at 08:01:44 AM BST +// Generated on: 2022.02.07 at 04:44:21 PM GMT // @@ -22,153 +22,153 @@ import javax.xml.bind.annotation.XmlType; * Describes different types of general annotations. * Equivalent to the flat file CC-line. * - *
Java class for commentType complex type. + * <p>Java class for commentType complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType name="commentType"> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="molecule" type="{http://uniprot.org/uniprot}moleculeType" minOccurs="0"/> - * <choice minOccurs="0"> - * <group ref="{http://uniprot.org/uniprot}bpcCommentGroup"/> - * <sequence> - * <element name="reaction" type="{http://uniprot.org/uniprot}reactionType"/> - * <element name="physiologicalReaction" type="{http://uniprot.org/uniprot}physiologicalReactionType" maxOccurs="2" minOccurs="0"/> - * </sequence> - * <sequence> - * <element name="cofactor" type="{http://uniprot.org/uniprot}cofactorType" maxOccurs="unbounded"/> - * </sequence> - * <sequence> - * <element name="subcellularLocation" type="{http://uniprot.org/uniprot}subcellularLocationType" maxOccurs="unbounded"/> - * </sequence> - * <element name="conflict"> - * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="sequence" minOccurs="0"> - * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <attribute name="resource" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="EMBL-CDS"/> - * <enumeration value="EMBL"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> - * </restriction> - * </complexContent> - * </complexType> - * </element> - * </sequence> - * <attribute name="type" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="frameshift"/> - * <enumeration value="erroneous initiation"/> - * <enumeration value="erroneous termination"/> - * <enumeration value="erroneous gene model prediction"/> - * <enumeration value="erroneous translation"/> - * <enumeration value="miscellaneous discrepancy"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /> - * </restriction> - * </complexContent> - * </complexType> - * </element> - * <sequence> - * <element name="link" maxOccurs="unbounded" minOccurs="0"> - * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /> - * </restriction> - * </complexContent> - * </complexType> - * </element> - * </sequence> - * <sequence> - * <element name="event" type="{http://uniprot.org/uniprot}eventType" maxOccurs="4"/> - * <element name="isoform" type="{http://uniprot.org/uniprot}isoformType" maxOccurs="unbounded" minOccurs="0"/> - * </sequence> - * <sequence> - * <element name="interactant" type="{http://uniprot.org/uniprot}interactantType" maxOccurs="2" minOccurs="2"/> - * <element name="organismsDiffer" type="{http://www.w3.org/2001/XMLSchema}boolean"/> - * <element name="experiments" type="{http://www.w3.org/2001/XMLSchema}int"/> - * </sequence> - * <element name="disease"> - * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/> - * </sequence> - * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * </restriction> - * </complexContent> - * </complexType> - * </element> - * </choice> - * <element name="location" type="{http://uniprot.org/uniprot}locationType" maxOccurs="unbounded" minOccurs="0"/> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> - * </sequence> - * <attribute name="type" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="allergen"/> - * <enumeration value="alternative products"/> - * <enumeration value="biotechnology"/> - * <enumeration value="biophysicochemical properties"/> - * <enumeration value="catalytic activity"/> - * <enumeration value="caution"/> - * <enumeration value="cofactor"/> - * <enumeration value="developmental stage"/> - * <enumeration value="disease"/> - * <enumeration value="domain"/> - * <enumeration value="disruption phenotype"/> - * <enumeration value="activity regulation"/> - * <enumeration value="function"/> - * <enumeration value="induction"/> - * <enumeration value="miscellaneous"/> - * <enumeration value="pathway"/> - * <enumeration value="pharmaceutical"/> - * <enumeration value="polymorphism"/> - * <enumeration value="PTM"/> - * <enumeration value="RNA editing"/> - * <enumeration value="similarity"/> - * <enumeration value="subcellular location"/> - * <enumeration value="sequence caution"/> - * <enumeration value="subunit"/> - * <enumeration value="tissue specificity"/> - * <enumeration value="toxic dose"/> - * <enumeration value="online information"/> - * <enumeration value="mass spectrometry"/> - * <enumeration value="interaction"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="locationType" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="name" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="mass" type="{http://www.w3.org/2001/XMLSchema}float" /> - * <attribute name="error" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="method" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType name="commentType"> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="molecule" type="{http://uniprot.org/uniprot}moleculeType" minOccurs="0"/> + * <choice minOccurs="0"> + * <group ref="{http://uniprot.org/uniprot}bpcCommentGroup"/> + * <sequence> + * <element name="reaction" type="{http://uniprot.org/uniprot}reactionType"/> + * <element name="physiologicalReaction" type="{http://uniprot.org/uniprot}physiologicalReactionType" maxOccurs="2" minOccurs="0"/> + * </sequence> + * <sequence> + * <element name="cofactor" type="{http://uniprot.org/uniprot}cofactorType" maxOccurs="unbounded"/> + * </sequence> + * <sequence> + * <element name="subcellularLocation" type="{http://uniprot.org/uniprot}subcellularLocationType" maxOccurs="unbounded"/> + * </sequence> + * <element name="conflict"> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="sequence" minOccurs="0"> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <attribute name="resource" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="EMBL-CDS"/> + * <enumeration value="EMBL"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> + * </restriction> + * </complexContent> + * </complexType> + * </element> + * </sequence> + * <attribute name="type" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="frameshift"/> + * <enumeration value="erroneous initiation"/> + * <enumeration value="erroneous termination"/> + * <enumeration value="erroneous gene model prediction"/> + * <enumeration value="erroneous translation"/> + * <enumeration value="miscellaneous discrepancy"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /> + * </restriction> + * </complexContent> + * </complexType> + * </element> + * <sequence> + * <element name="link" maxOccurs="unbounded" minOccurs="0"> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /> + * </restriction> + * </complexContent> + * </complexType> + * </element> + * </sequence> + * <sequence> + * <element name="event" type="{http://uniprot.org/uniprot}eventType" maxOccurs="4"/> + * <element name="isoform" type="{http://uniprot.org/uniprot}isoformType" maxOccurs="unbounded" minOccurs="0"/> + * </sequence> + * <sequence> + * <element name="interactant" type="{http://uniprot.org/uniprot}interactantType" maxOccurs="2" minOccurs="2"/> + * <element name="organismsDiffer" type="{http://www.w3.org/2001/XMLSchema}boolean"/> + * <element name="experiments" type="{http://www.w3.org/2001/XMLSchema}int"/> + * </sequence> + * <element name="disease"> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/> + * </sequence> + * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * </restriction> + * </complexContent> + * </complexType> + * </element> + * </choice> + * <element name="location" type="{http://uniprot.org/uniprot}locationType" maxOccurs="unbounded" minOccurs="0"/> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> + * </sequence> + * <attribute name="type" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="allergen"/> + * <enumeration value="alternative products"/> + * <enumeration value="biotechnology"/> + * <enumeration value="biophysicochemical properties"/> + * <enumeration value="catalytic activity"/> + * <enumeration value="caution"/> + * <enumeration value="cofactor"/> + * <enumeration value="developmental stage"/> + * <enumeration value="disease"/> + * <enumeration value="domain"/> + * <enumeration value="disruption phenotype"/> + * <enumeration value="activity regulation"/> + * <enumeration value="function"/> + * <enumeration value="induction"/> + * <enumeration value="miscellaneous"/> + * <enumeration value="pathway"/> + * <enumeration value="pharmaceutical"/> + * <enumeration value="polymorphism"/> + * <enumeration value="PTM"/> + * <enumeration value="RNA editing"/> + * <enumeration value="similarity"/> + * <enumeration value="subcellular location"/> + * <enumeration value="sequence caution"/> + * <enumeration value="subunit"/> + * <enumeration value="tissue specificity"/> + * <enumeration value="toxic dose"/> + * <enumeration value="online information"/> + * <enumeration value="mass spectrometry"/> + * <enumeration value="interaction"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="locationType" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="name" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="mass" type="{http://www.w3.org/2001/XMLSchema}float" /> + * <attribute name="error" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="method" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -404,20 +404,20 @@ public class CommentType { /** * Gets the value of the physiologicalReaction property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the physiologicalReaction property.
+ * This is why there is not a <CODE>set</CODE> method for the physiologicalReaction property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getPhysiologicalReaction().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link PhysiologicalReactionType } * @@ -433,20 +433,20 @@ public class CommentType { /** * Gets the value of the cofactor property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the cofactor property.
+ * This is why there is not a <CODE>set</CODE> method for the cofactor property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getCofactor().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link CofactorType } * @@ -462,20 +462,20 @@ public class CommentType { /** * Gets the value of the subcellularLocation property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the subcellularLocation property.
+ * This is why there is not a <CODE>set</CODE> method for the subcellularLocation property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getSubcellularLocation().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link SubcellularLocationType } * @@ -515,20 +515,20 @@ public class CommentType { /** * Gets the value of the link property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the link property.
+ * This is why there is not a <CODE>set</CODE> method for the link property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getLink().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link CommentType.Link } * @@ -544,20 +544,20 @@ public class CommentType { /** * Gets the value of the event property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the event property.
+ * This is why there is not a <CODE>set</CODE> method for the event property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getEvent().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EventType } * @@ -573,20 +573,20 @@ public class CommentType { /** * Gets the value of the isoform property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the isoform property.
+ * This is why there is not a <CODE>set</CODE> method for the isoform property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getIsoform().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link IsoformType } * @@ -602,20 +602,20 @@ public class CommentType { /** * Gets the value of the interactant property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the interactant property.
+ * This is why there is not a <CODE>set</CODE> method for the interactant property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getInteractant().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link InteractantType } * @@ -703,20 +703,20 @@ public class CommentType { /** * Gets the value of the location property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the location property.
+ * This is why there is not a <CODE>set</CODE> method for the location property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getLocation().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link LocationType } * @@ -732,20 +732,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -905,20 +905,20 @@ public class CommentType { /** * Gets the value of the evidence property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the evidence property.
+ * This is why there is not a <CODE>set</CODE> method for the evidence property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getEvidence().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link Integer } * @@ -933,22 +933,22 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="max" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="max" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -989,20 +989,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1019,51 +1019,51 @@ public class CommentType { /** - *
Java class for anonymous complex type. - * - *
The following schema fragment specifies the expected content contained within this class. - * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="sequence" minOccurs="0"> - * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <attribute name="resource" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="EMBL-CDS"/> - * <enumeration value="EMBL"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> - * </restriction> - * </complexContent> - * </complexType> - * </element> - * </sequence> - * <attribute name="type" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="frameshift"/> - * <enumeration value="erroneous initiation"/> - * <enumeration value="erroneous termination"/> - * <enumeration value="erroneous gene model prediction"/> - * <enumeration value="erroneous translation"/> - * <enumeration value="miscellaneous discrepancy"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /> - * </restriction> - * </complexContent> - * </complexType> - *+ * <p>Java class for anonymous complex type. + * + * <p>The following schema fragment specifies the expected content contained within this class. + * + * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="sequence" minOccurs="0"> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <attribute name="resource" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="EMBL-CDS"/> + * <enumeration value="EMBL"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> + * </restriction> + * </complexContent> + * </complexType> + * </element> + * </sequence> + * <attribute name="type" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="frameshift"/> + * <enumeration value="erroneous initiation"/> + * <enumeration value="erroneous termination"/> + * <enumeration value="erroneous gene model prediction"/> + * <enumeration value="erroneous translation"/> + * <enumeration value="miscellaneous discrepancy"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1153,28 +1153,28 @@ public class CommentType { /** - *
Java class for anonymous complex type. - * - *
The following schema fragment specifies the expected content contained within this class. - * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <attribute name="resource" use="required"> - * <simpleType> - * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> - * <enumeration value="EMBL-CDS"/> - * <enumeration value="EMBL"/> - * </restriction> - * </simpleType> - * </attribute> - * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> - * </restriction> - * </complexContent> - * </complexType> - *+ * <p>Java class for anonymous complex type. + * + * <p>The following schema fragment specifies the expected content contained within this class. + * + * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <attribute name="resource" use="required"> + * <simpleType> + * <restriction base="{http://www.w3.org/2001/XMLSchema}string"> + * <enumeration value="EMBL-CDS"/> + * <enumeration value="EMBL"/> + * </restriction> + * </simpleType> + * </attribute> + * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1267,25 +1267,25 @@ public class CommentType { /** - *
Java class for anonymous complex type. - * - *
The following schema fragment specifies the expected content contained within this class. - * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/> - * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/> - * </sequence> - * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> - * </restriction> - * </complexContent> - * </complexType> - *+ * <p>Java class for anonymous complex type. + * + * <p>The following schema fragment specifies the expected content contained within this class. + * + * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/> + * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/> + * </sequence> + * <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1433,23 +1433,23 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="KM" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> - * <element name="Vmax" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="KM" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> + * <element name="Vmax" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1470,20 +1470,20 @@ public class CommentType { /** * Gets the value of the km property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the km property.
+ * This is why there is not a <CODE>set</CODE> method for the km property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getKM().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1499,20 +1499,20 @@ public class CommentType { /** * Gets the value of the vmax property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the vmax property.
+ * This is why there is not a <CODE>set</CODE> method for the vmax property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getVmax().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1528,20 +1528,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1558,19 +1558,19 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1610,21 +1610,21 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1640,20 +1640,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1670,21 +1670,21 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1700,20 +1700,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1730,21 +1730,21 @@ public class CommentType { /** - *
Java class for anonymous complex type. + * <p>Java class for anonymous complex type. * - *
The following schema fragment specifies the expected content contained within this class. + * <p>The following schema fragment specifies the expected content contained within this class. * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *+ * <pre> + * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + * </pre> * * */ @@ -1760,20 +1760,20 @@ public class CommentType { /** * Gets the value of the text property. * - *
+ * <p>
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
- * This is why there is not a set
method for the text property.
+ * This is why there is not a <CODE>set</CODE> method for the text property.
*
- *
+ * <p> * For example, to add a new item, do as follows: - *
+ * <pre> * getText().add(newItem); - *+ * </pre> * * - *
+ * <p> * Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } *