X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Forg%2Fvamsas%2Fobjects%2Fcore%2FVAMSASDescriptor.java;h=e46ddd01b666dca8f34191200444a99118a5b236;hb=a54f7d71affe4e9cd7a7b0f6137e44f5b82b7a9d;hp=a01bd5529309295378d0e35e822c4ef12e192a33;hpb=3af890bd709e15615c0b98b2e23a090c21a8eccf;p=vamsas.git

diff --git a/src/org/vamsas/objects/core/VAMSASDescriptor.java b/src/org/vamsas/objects/core/VAMSASDescriptor.java
index a01bd55..e46ddd0 100644
--- a/src/org/vamsas/objects/core/VAMSASDescriptor.java
+++ b/src/org/vamsas/objects/core/VAMSASDescriptor.java
@@ -1,6 +1,6 @@
 /*
  * This class was automatically generated with 
- * <a href="http://www.castor.org">Castor 0.9.9M1</a>, using an XML
+ * <a href="http://www.castor.org">Castor 0.9.9M2</a>, using an XML
  * Schema.
  * $Id$
  */
@@ -66,31 +66,64 @@ public class VAMSASDescriptor extends org.exolab.castor.xml.util.XMLClassDescrip
         org.exolab.castor.xml.FieldValidator               fieldValidator = null;
         //-- initialize attribute descriptors
         
+        //-- _id
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
+        this.identity = desc;
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                VAMSAS target = (VAMSAS) object;
+                return target.getId();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    VAMSAS target = (VAMSAS) object;
+                    target.setId( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return new java.lang.String();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setMultivalued(false);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _id
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+        }
+        desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
-        //-- _treeList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_treeList", "Tree", org.exolab.castor.xml.NodeType.Element);
-        desc.setImmutable(true);
+        //-- _dendroList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Dendro.class, "_dendroList", "Dendro", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 VAMSAS target = (VAMSAS) object;
-                return target.getTree();
+                return target.getDendro();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     VAMSAS target = (VAMSAS) object;
-                    target.addTree( (java.lang.String) value);
+                    target.addDendro( (org.vamsas.objects.core.Dendro) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return null;
+                return new org.vamsas.objects.core.Dendro();
             }
         };
         desc.setHandler(handler);
@@ -98,13 +131,10 @@ public class VAMSASDescriptor extends org.exolab.castor.xml.util.XMLClassDescrip
         desc.setMultivalued(true);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _treeList
+        //-- validation code for: _dendroList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         fieldValidator.setMinOccurs(0);
         { //-- local scope
-            StringValidator typeValidator = new StringValidator();
-            typeValidator.setWhiteSpace("preserve");
-            fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
         //-- _sequenceSetList