X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src2%2Ffr%2Forsay%2Flri%2Fvarna%2Fviews%2FVueBaseValues.java;fp=src2%2Ffr%2Forsay%2Flri%2Fvarna%2Fviews%2FVueBaseValues.java;h=0000000000000000000000000000000000000000;hb=d27359893c99db0e749a59d8a7ab73ea751da09e;hp=980ac6538e19a1b1fcc5d0e9af74d4a803895fcd;hpb=9f55415c9f8005e9dcd8243453883ff853fd5b76;p=jalview.git

diff --git a/src2/fr/orsay/lri/varna/views/VueBaseValues.java b/src2/fr/orsay/lri/varna/views/VueBaseValues.java
deleted file mode 100644
index 980ac65..0000000
--- a/src2/fr/orsay/lri/varna/views/VueBaseValues.java
+++ /dev/null
@@ -1,134 +0,0 @@
-package fr.orsay.lri.varna.views;
-
-import java.awt.Color;
-import java.awt.Dimension;
-import java.awt.GridLayout;
-import java.beans.PropertyChangeEvent;
-import java.beans.PropertyVetoException;
-import java.beans.VetoableChangeListener;
-import java.util.ArrayList;
-import java.util.Vector;
-
-import javax.swing.JPanel;
-import javax.swing.JScrollPane;
-import javax.swing.JTable;
-import javax.swing.event.TableModelEvent;
-import javax.swing.event.TableModelListener;
-import javax.swing.table.AbstractTableModel;
-
-import fr.orsay.lri.varna.VARNAPanel;
-import fr.orsay.lri.varna.components.ColorRenderer;
-import fr.orsay.lri.varna.models.rna.ModeleBase;
-import fr.orsay.lri.varna.models.rna.ModeleBaseNucleotide;
-import fr.orsay.lri.varna.models.rna.ModeleColorMap;
-import fr.orsay.lri.varna.models.rna.RNA;
-
-public class VueBaseValues extends JPanel implements TableModelListener {
-
-	private JTable table;
-	private ValueTableModel _tm;
-	private VARNAPanel _vp;
-	private ArrayList<ModeleBase> data;
-	private ArrayList<Double> _backup;
-	private ArrayList<Object> columns;
-	
-	
-	public VueBaseValues(VARNAPanel vp)
-	{
-		super(new GridLayout(1, 0));
-		_vp = vp;
-		init();
-	}
-	
-	private void init()
-	{
-		Object[] col = {"Number","Base","Value","Preview"};
-		columns = new ArrayList<Object>();
-		for (int i = 0; i < col.length; i++)
-		{
-			columns.add(col[i]);
-		}
-		
-		_backup = new ArrayList<Double>();
-		data = new ArrayList<ModeleBase>();
-		for (int i = 0; i < _vp.getRNA().get_listeBases().size(); i++) 
-		{
-			ModeleBase mb = _vp.getRNA().get_listeBases().get(i);
-			data.add(mb);
-			_backup.add(mb.getValue());
-		}
-		_tm = new ValueTableModel();
-		table = new JTable(_tm);
-		table.setDefaultRenderer(Color.class, new ColorRenderer(true)); 
-		table.setPreferredScrollableViewportSize(new Dimension(300, 300));
-		table.getModel().addTableModelListener(this);
-		
-		JScrollPane scrollPane = new JScrollPane(table);
-		this.add(scrollPane);
-	}
-	
-	public void cancelChanges()
-	{
-		for (int i = 0; i < _vp.getRNA().get_listeBases().size(); i++) 
-		{
-			ModeleBase mb = _vp.getRNA().get_listeBases().get(i);
-			mb.setValue(_backup.get(i));
-		}
-  	  _vp.getRNA().rescaleColorMap(_vp.getColorMap());
-	}
-
-	private class ValueTableModel extends AbstractTableModel {
-	    public String getColumnName(int col) {
-	        return columns.get(col).toString();
-	    }
-	    public int getRowCount() { return data.size(); }
-	    public int getColumnCount() { return columns.size(); }
-	    public Object getValueAt(int row, int col) {
-	    	ModeleBase mb = data.get(row);
-	    	if (col==0)
-	    	{
-	    		return new Integer(mb.getBaseNumber());
-	    	}
-	    	else if (col==1)
-	    	{
-	    		return new String(mb.getContent());
-	    	} 
-	    	else if (col==2)
-	    	{
-	    		return new Double(mb.getValue());
-	    	} 
-	    	else if (col==3)
-	    	{
-	    		return _vp.getColorMap().getColorForValue(mb.getValue());
-	    	}
-	    	return "N/A";
-	    }
-	    public boolean isCellEditable(int row, int col)
-	        { 
-	    		if (getColumnName(col).equals("Value")) 
-	    			return true;
-	    		return false;
-	        }
-	    public void setValueAt(Object value, int row, int col) {
-	    	if (getColumnName(col).equals("Value"))
-	    	{
-	    	  data.get(row).setValue(((Double)value));
-	    	  _vp.getRNA().rescaleColorMap(_vp.getColorMap());
-	    	  _vp.repaint();
-	          fireTableCellUpdated(row, col);
-	    	}
-	    }
-	    public Class getColumnClass(int c) {
-	        return getValueAt(0, c).getClass();
-	    }
-	}
-
-	public void tableChanged(TableModelEvent e) {
-		if (e.getType() == TableModelEvent.UPDATE)
-		{
-			table.repaint();
-		}
-		
-	}
-
-}