X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=srcjar%2Ffr%2Forsay%2Flri%2Fvarna%2Fcomponents%2FBaseTableModel.java;fp=srcjar%2Ffr%2Forsay%2Flri%2Fvarna%2Fcomponents%2FBaseTableModel.java;h=cf04d61732401fd8dda16571b4b26a58a62fcba2;hb=ec8f3cedf60fb1feed6d34de6b49f6bfa78b9dd8;hp=0000000000000000000000000000000000000000;hpb=056dad85a910551cc95e44d451a61f6b8c4dd35d;p=jalview.git diff --git a/srcjar/fr/orsay/lri/varna/components/BaseTableModel.java b/srcjar/fr/orsay/lri/varna/components/BaseTableModel.java new file mode 100644 index 0000000..cf04d61 --- /dev/null +++ b/srcjar/fr/orsay/lri/varna/components/BaseTableModel.java @@ -0,0 +1,110 @@ +/* + VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases. + Copyright (C) 2008 Kevin Darty, Alain Denise and Yann Ponty. + electronic mail : Yann.Ponty@lri.fr + paper mail : LRI, bat 490 Université Paris-Sud 91405 Orsay Cedex France + + This file is part of VARNA version 3.1. + VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License + as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + + VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; + without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. + See the GNU General Public License for more details. + + You should have received a copy of the GNU General Public License along with VARNA version 3.1. + If not, see http://www.gnu.org/licenses. + */ +package fr.orsay.lri.varna.components; + +import java.awt.Color; +import java.util.ArrayList; + +import javax.swing.table.AbstractTableModel; + +import fr.orsay.lri.varna.models.BaseList; +import fr.orsay.lri.varna.models.VARNAConfig; +import fr.orsay.lri.varna.models.rna.ModeleBase; +import fr.orsay.lri.varna.models.rna.ModelBaseStyle; + + +public class BaseTableModel extends AbstractTableModel { + /** + * + */ + private static final long serialVersionUID = 1L; + + private String[] columnNames = { "Numbers", "Base", "Outline Color", "Inner Color", + "Name Color", "Number Color" }; + private ArrayList> data = new ArrayList>(); + private ArrayList _bases; + private boolean _singleBases = true; + + public BaseTableModel(ArrayList bases) { + _bases = bases; + ArrayList ligne; + for (int i = 0; i < bases.size(); i++) { + ligne = new ArrayList(); + BaseList bl = bases.get(i); + if (bl.size()!=1) + { + _singleBases = false; + } + ligne.add(bl.getNumbers()); + ligne.add(bl.getContents()); + ligne.add(bl.getAverageOutlineColor()); + ligne.add(bl.getAverageInnerColor()); + ligne.add(bl.getAverageNameColor()); + ligne.add(bl.getAverageNumberColor()); + this.data.add(ligne); + } + + } + + public int getColumnCount() { + return columnNames.length; + } + + public int getRowCount() { + return data.size(); + } + + public String getColumnName(int col) { + return columnNames[col]; + } + + public Object getValueAt(int row, int col) { + return data.get(row).get(col); + } + + /* + * JTable uses this method to determine the default renderer/ editor for + * each cell. If we didn't implement this method, then the last column would + * contain text ("true"/"false"), rather than a check box. + */ + @SuppressWarnings("unchecked") + public Class getColumnClass(int c) { + return getValueAt(0, c).getClass(); + } + + public boolean isCellEditable(int row, int col) { + // Note that the data/cell address is constant, + // no matter where the cell appears onscreen. + if (col < 1) { + return false; + } else { + return true; + } + } + + public void setValueAt(Object value, int row, int col) { + data.get(row).set(col, value); + if (col == 1 && _singleBases) + { + ModeleBase mb = _bases.get(row).getBases().get(0); + mb.setContent(value.toString()); + } + fireTableCellUpdated(row, col); + + } +} \ No newline at end of file