X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2FMCview%2FPDBChainTest.java;h=defcdbc1dac7099af48cf0f166fb2fe8528d8333;hb=136c0793b90b72b928c4d77dc109dd5c644e00d3;hp=713293934ad2eaf604ab83aa0d8ef0c02f21092d;hpb=8677e6e34e291edc58c1da2fc9c958473754143f;p=jalview.git diff --git a/test/MCview/PDBChainTest.java b/test/MCview/PDBChainTest.java index 7132939..defcdbc 100644 --- a/test/MCview/PDBChainTest.java +++ b/test/MCview/PDBChainTest.java @@ -36,6 +36,7 @@ import jalview.schemes.TaylorColourScheme; import jalview.structure.StructureImportSettings; import java.awt.Color; +import java.util.List; import java.util.Vector; import org.testng.annotations.BeforeClass; @@ -258,19 +259,19 @@ public class PDBChainTest /* * check sequence features */ - SequenceFeature[] sfs = c.sequence.getSequenceFeatures(); - assertEquals(3, sfs.length); - assertEquals("RESNUM", sfs[0].type); - assertEquals("MET:4 1gaqA", sfs[0].description); - assertEquals(4, sfs[0].begin); - assertEquals(4, sfs[0].end); - assertEquals("RESNUM", sfs[0].type); - assertEquals("LYS:5 1gaqA", sfs[1].description); - assertEquals(5, sfs[1].begin); - assertEquals(5, sfs[1].end); - assertEquals("LEU:6 1gaqA", sfs[2].description); - assertEquals(6, sfs[2].begin); - assertEquals(6, sfs[2].end); + List sfs = c.sequence.getSequenceFeatures(); + assertEquals(3, sfs.size()); + assertEquals("RESNUM", sfs.get(0).type); + assertEquals("MET:4 1gaqA", sfs.get(0).description); + assertEquals(4, sfs.get(0).begin); + assertEquals(4, sfs.get(0).end); + assertEquals("RESNUM", sfs.get(0).type); + assertEquals("LYS:5 1gaqA", sfs.get(1).description); + assertEquals(5, sfs.get(1).begin); + assertEquals(5, sfs.get(1).end); + assertEquals("LEU:6 1gaqA", sfs.get(2).description); + assertEquals(6, sfs.get(2).begin); + assertEquals(6, sfs.get(2).end); } private Atom makeAtom(int resnum, String name, String resname)