X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FAlignSeqTest.java;fp=test%2Fjalview%2Fanalysis%2FAlignSeqTest.java;h=a9a9730c3bfcc52b95c52b9ee67b192970e84f37;hb=9949854f4c2dc75980f15acdee69594ca6b22631;hp=bd827f96d7b5d70dd314b2d0f656c4740a790451;hpb=cfba86992cd64bb0df6105bbf5dfc076ba8a93b2;p=jalview.git

diff --git a/test/jalview/analysis/AlignSeqTest.java b/test/jalview/analysis/AlignSeqTest.java
index bd827f9..a9a9730 100644
--- a/test/jalview/analysis/AlignSeqTest.java
+++ b/test/jalview/analysis/AlignSeqTest.java
@@ -58,8 +58,8 @@ public class AlignSeqTest
   @Test(groups = { "Functional" })
   public void testIndexEncode_nucleotide()
   {
-    AlignSeq as = new AlignSeq(new Sequence("s1", "TTAG"), new Sequence(
-            "s2", "ACGT"), AlignSeq.DNA);
+    AlignSeq as = new AlignSeq(new Sequence("s1", "TTAG"),
+            new Sequence("s2", "ACGT"), AlignSeq.DNA);
     int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 3, 3, 4, 4, 5, 5, 6, 6,
         7, 7, 8, 8, 9, 9, -1, -1, 10, -1 };
     String s = "aAcCgGtTuUiIxXrRyYnN .-?";
@@ -69,8 +69,8 @@ public class AlignSeqTest
   @Test(groups = { "Functional" })
   public void testIndexEncode_peptide()
   {
-    AlignSeq as = new AlignSeq(new Sequence("s1", "PFY"), new Sequence(
-            "s2", "RQW"), AlignSeq.PEP);
+    AlignSeq as = new AlignSeq(new Sequence("s1", "PFY"),
+            new Sequence("s2", "RQW"), AlignSeq.PEP);
     int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 21, 21, 22, 22, -1, 23,
         -1, -1, -1 };
     String s = "aArRnNzZxX *.-?";