X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FDnaTest.java;h=55908dd9ca94970c6136bdff9fd0b0a1de99127a;hb=ab22918ab8fc67d30dad1fb1ae0f37e51f49df95;hp=6371315e70abcd19d2ef014e5f7babb53b317dac;hpb=48510d15aac939c20aa9db69f9ab8e948266c1cb;p=jalview.git diff --git a/test/jalview/analysis/DnaTest.java b/test/jalview/analysis/DnaTest.java index 6371315..55908dd 100644 --- a/test/jalview/analysis/DnaTest.java +++ b/test/jalview/analysis/DnaTest.java @@ -94,7 +94,7 @@ public class DnaTest * * @throws IOException */ - @Test + @Test(groups ={ "Functional" }) public void testTranslateCdna_withUntranslatableCodons() throws IOException { @@ -116,7 +116,7 @@ public class DnaTest * * @throws IOException */ - @Test + @Test(groups ={ "Functional" }) public void testTranslateCdna_withUntranslatableCodonsAndHiddenColumns() throws IOException { @@ -152,7 +152,7 @@ public class DnaTest * * @throws IOException */ - @Test + @Test(groups ={ "Functional" }) public void testTranslateCdna_simple() throws IOException { AlignmentI alf = new FormatAdapter().readFile(fasta, @@ -173,7 +173,7 @@ public class DnaTest * * @throws IOException */ - @Test + @Test(groups ={ "Functional" }) public void testTranslateCdna_hiddenColumns() throws IOException { AlignmentI alf = new FormatAdapter().readFile(fasta, @@ -193,7 +193,7 @@ public class DnaTest /** * Use this test to help debug into any cases of interest. */ - @Test + @Test(groups ={ "Functional" }) public void testCompareCodonPos_oneOnly() { assertFollows("-AA--A", "G--GG"); // 2 shifted seq2, 3 shifted seq1 @@ -202,7 +202,7 @@ public class DnaTest /** * Tests for method that compares 'alignment' of two codon position triplets. */ - @Test + @Test(groups ={ "Functional" }) public void testCompareCodonPos() { /* @@ -259,7 +259,7 @@ public class DnaTest * reorders the cDNA and retranslates, and verifies that the translations are * the same (apart from ordering). */ - @Test + @Test(groups ={ "Functional" }) public void testTranslateCdna_sequenceOrderIndependent() { /* @@ -313,7 +313,7 @@ public class DnaTest * Test that all the cases in testCompareCodonPos have a 'symmetric' * comparison (without checking the actual comparison result). */ - @Test + @Test(groups ={ "Functional" }) public void testCompareCodonPos_isSymmetric() { assertSymmetric("AAA", "GGG"); @@ -436,7 +436,7 @@ public class DnaTest /** * Weirdly, maybe worth a test to prove the helper method of this test class. */ - @Test + @Test(groups ={ "Functional" }) public void testConvertCodon() { assertEquals("[0, 1, 2]", convertCodon("AAA").toString());