X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FFinderTest.java;fp=test%2Fjalview%2Fanalysis%2FFinderTest.java;h=7e3bd86f2e341cc9ffd2e50396d3d5b2631defa1;hb=9c98d4bd666346f6ad3892c5394b7da3be82d93e;hp=1f45f70d597d334b57db6ed92771bb2338537a00;hpb=c7b2143c9cf7c5e05ad63251f7d3910751b16d20;p=jalview.git diff --git a/test/jalview/analysis/FinderTest.java b/test/jalview/analysis/FinderTest.java index 1f45f70..7e3bd86 100644 --- a/test/jalview/analysis/FinderTest.java +++ b/test/jalview/analysis/FinderTest.java @@ -131,11 +131,12 @@ public class FinderTest * single symbol should find *all* matching symbols */ Finder f = new Finder(av); - f.findAll("M", false,false,false); + f.findAll("M", false, false, false); SearchResultsI sr = f.getSearchResults(); - assertEquals(sr.getCount(),5); - + assertEquals(sr.getCount(), 5); + } + /** * Test for (undocumented) find residue by position */ @@ -575,7 +576,7 @@ public class FinderTest sg.addSequence(al.getSequenceAt(1), false); sg.addSequence(al.getSequenceAt(2), false); av.setSelectionGroup(sg); - + /* * search for 'e' should match two sequence ids and one residue */ @@ -641,8 +642,8 @@ public class FinderTest } /** - * Test that find does not report hidden positions, but does report matches that - * span hidden gaps + * Test that find does not report hidden positions, but does report matches + * that span hidden gaps */ @Test(groups = "Functional") public void testFind_withHiddenColumns() @@ -770,7 +771,7 @@ public class FinderTest * --bcdEFH * aa---aMMMMMaaa */ - + /* * hide columns 2-4 and 6-7 */ @@ -778,7 +779,7 @@ public class FinderTest hc.hideColumns(2, 4); hc.hideColumns(6, 7); al.setHiddenColumns(hc); - + /* * select rows 2-3 */