X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FTestAlignSeq.java;fp=test%2Fjalview%2Fanalysis%2FTestAlignSeq.java;h=7352b941461b1d683f1d53a700c22482da253493;hb=cf491d18e6affbfacfc67eda7c6bceedd457982f;hp=ca4f18dbf83959294cb3b4ab10f6c9f24ba9b687;hpb=5dc62d509b6d0f90f3545bf40b272390410eda45;p=jalview.git diff --git a/test/jalview/analysis/TestAlignSeq.java b/test/jalview/analysis/TestAlignSeq.java index ca4f18d..7352b94 100644 --- a/test/jalview/analysis/TestAlignSeq.java +++ b/test/jalview/analysis/TestAlignSeq.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -20,7 +20,9 @@ */ package jalview.analysis; -import static org.junit.Assert.*; +import static org.junit.Assert.assertEquals; +import static org.junit.Assert.assertNull; +import static org.junit.Assert.assertTrue; import jalview.datamodel.Mapping; import jalview.datamodel.Sequence; import jalview.datamodel.SequenceI; @@ -74,4 +76,13 @@ public class TestAlignSeq } } + @Test + public void testExtractGaps() + { + assertNull(AlignSeq.extractGaps(null, null)); + assertNull(AlignSeq.extractGaps(". -", null)); + assertNull(AlignSeq.extractGaps(null, "AB-C")); + + assertEquals("ABCD", AlignSeq.extractGaps(" .-", ". -A-B.C D.")); + } }