X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fbin%2FCommandsTest2.java;fp=test%2Fjalview%2Fbin%2FCommandsTest2.java;h=d6b6f3c2ed63d86ac647b6ab0c740e2b5a656ee5;hb=4a6e033ecbe830a86d77f8910beb90b09522aceb;hp=0c2071a70923a13a3ec0cdfe66276545179d9ae6;hpb=0f72eae506d32d20f11908522330d49889818f10;p=jalview.git

diff --git a/test/jalview/bin/CommandsTest2.java b/test/jalview/bin/CommandsTest2.java
index 0c2071a..d6b6f3c 100644
--- a/test/jalview/bin/CommandsTest2.java
+++ b/test/jalview/bin/CommandsTest2.java
@@ -65,14 +65,18 @@ public class CommandsTest2
     String[] args = cmdLine.split("\\s+");
 
     CommandsTest.callJalviewMain(args);
-    try
+    while (Desktop.instance!=null && Desktop.instance.operationsAreInProgress())
     {
-      // sleep for slow build server to open annotations and viewer windows
-      Thread.sleep(seqNum * 50 + annNum * 50 + viewerNum * 500);
-    } catch (InterruptedException e)
-    {
-      e.printStackTrace();
+      try
+      {
+        // sleep for slow build server to open annotations and viewer windows
+        Thread.sleep(viewerNum * 50);
+      } catch (InterruptedException e)
+      {
+        e.printStackTrace();
+      }
     }
+    ;
 
     AlignFrame[] afs = Desktop.getAlignFrames();
     Assert.assertNotNull(afs);