X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2Ffeatures%2FFeatureAttributesTest.java;fp=test%2Fjalview%2Fdatamodel%2Ffeatures%2FFeatureAttributesTest.java;h=d9efa23b560696822d9627de5bab21138932f071;hb=586ade46bdcd05ff028a1cff82c3c527326d28ec;hp=0846ec26814e1a875f819773cadc9fb3e3924d27;hpb=adcef27f5747b4e70e89a56c3735bc3afb8ce9bf;p=jalview.git diff --git a/test/jalview/datamodel/features/FeatureAttributesTest.java b/test/jalview/datamodel/features/FeatureAttributesTest.java index 0846ec2..d9efa23 100644 --- a/test/jalview/datamodel/features/FeatureAttributesTest.java +++ b/test/jalview/datamodel/features/FeatureAttributesTest.java @@ -44,7 +44,7 @@ public class FeatureAttributesTest * Test the method that keeps attribute names in non-case-sensitive order, * including handling of 'compound' names */ - @Test(groups="Functional") + @Test(groups = "Functional") public void testAttributeNameComparator() { FeatureAttributes fa = FeatureAttributes.getInstance(); @@ -52,19 +52,24 @@ public class FeatureAttributesTest "comparator"); assertEquals( - comp.compare(new String[] { "CSQ" }, new String[] { "csq" }), 0); + comp.compare(new String[] + { "CSQ" }, new String[] { "csq" }), 0); - assertTrue(comp.compare(new String[] { "CSQ", "a" }, - new String[] { "csq" }) > 0); + assertTrue( + comp.compare(new String[] + { "CSQ", "a" }, new String[] { "csq" }) > 0); - assertTrue(comp.compare(new String[] { "CSQ" }, new String[] { "csq", - "b" }) < 0); + assertTrue( + comp.compare(new String[] + { "CSQ" }, new String[] { "csq", "b" }) < 0); - assertTrue(comp.compare(new String[] { "CSQ", "AF" }, new String[] { - "csq", "ac" }) > 0); + assertTrue( + comp.compare(new String[] + { "CSQ", "AF" }, new String[] { "csq", "ac" }) > 0); - assertTrue(comp.compare(new String[] { "CSQ", "ac" }, new String[] { - "csq", "AF" }) < 0); + assertTrue( + comp.compare(new String[] + { "CSQ", "ac" }, new String[] { "csq", "AF" }) < 0); } @Test(groups = "Functional") @@ -124,10 +129,13 @@ public class FeatureAttributesTest "group"); sf.setValue("kd", "-1"); sf.setValue("domain", "Metal"); + sf.setValue("foo", " "); sf.setValue("phase", "1"); - sf.setValue("phase", "reverse"); + sf.setValue("phase", "1reverse"); assertEquals(fa.getDatatype("Pfam", "kd"), Datatype.Number); assertEquals(fa.getDatatype("Pfam", "domain"), Datatype.Character); assertEquals(fa.getDatatype("Pfam", "phase"), Datatype.Mixed); + assertNull(fa.getDatatype("Pfam", "unobserved")); + assertNull(fa.getDatatype("Pfam", "foo"));// empty values are ignored } }