X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2Fxdb%2Fembl%2FEmblEntryTest.java;h=46725741b8be88841939f8ba95d7d31adf6b4e39;hb=7e82e1fed011077e5cd4cc40ac8ad3519d7c47a8;hp=abe5099ff49096944b9e179990a5a9422da4cd4d;hpb=02d6aa2077a261d41db77a0158f2b4b779a36398;p=jalview.git diff --git a/test/jalview/datamodel/xdb/embl/EmblEntryTest.java b/test/jalview/datamodel/xdb/embl/EmblEntryTest.java index abe5099..4672574 100644 --- a/test/jalview/datamodel/xdb/embl/EmblEntryTest.java +++ b/test/jalview/datamodel/xdb/embl/EmblEntryTest.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.datamodel.xdb.embl; import static org.testng.AssertJUnit.assertEquals; @@ -8,16 +28,26 @@ import jalview.analysis.SequenceIdMatcher; import jalview.datamodel.DBRefEntry; import jalview.datamodel.DBRefSource; import jalview.datamodel.SequenceI; +import jalview.gui.JvOptionPane; import jalview.util.MapList; import java.util.ArrayList; import java.util.Arrays; import java.util.List; +import org.testng.annotations.BeforeClass; import org.testng.annotations.Test; public class EmblEntryTest { + + @BeforeClass(alwaysRun = true) + public void setUpJvOptionPane() + { + JvOptionPane.setInteractiveMode(false); + JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION); + } + @Test(groups = "Functional") public void testGetCdsRanges() { @@ -216,8 +246,7 @@ public class EmblEntryTest // truncate last exon by 6bp int[] truncated = EmblEntry.adjustForProteinLength(4, exons); - assertEquals("[11, 15, 21, 25, 31, 32]", - Arrays.toString(truncated)); + assertEquals("[11, 15, 21, 25, 31, 32]", Arrays.toString(truncated)); // remove last exon and truncate preceding by 1bp truncated = EmblEntry.adjustForProteinLength(3, exons);