X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fext%2Frbvi%2Fchimera%2FJalviewChimeraView.java;fp=test%2Fjalview%2Fext%2Frbvi%2Fchimera%2FJalviewChimeraView.java;h=e8b5bea8cf47ccbe9dd362cded257546455838be;hb=82083dc3796ac12fabd4defae3ceee2b16ff4f6d;hp=d397a6bd40231f9246ee6e06de556634a4c7822d;hpb=fa8a0ce92e350f285da4e02da130e2cc1ffee85a;p=jalview.git

diff --git a/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java b/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java
index d397a6b..e8b5bea 100644
--- a/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java
+++ b/test/jalview/ext/rbvi/chimera/JalviewChimeraView.java
@@ -39,8 +39,10 @@ import jalview.api.FeatureRenderer;
 import jalview.api.structures.JalviewStructureDisplayI;
 import jalview.bin.Cache;
 import jalview.bin.Jalview;
+import jalview.datamodel.AlignmentI;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.PDBEntry;
+import jalview.datamodel.Sequence;
 import jalview.datamodel.SequenceFeature;
 import jalview.datamodel.SequenceI;
 import jalview.gui.AlignFrame;
@@ -118,6 +120,7 @@ public class JalviewChimeraView
   @Test(groups = { "External" })
   public void testSingleSeqViewChimera()
   {
+
     String inFile = "examples/1gaq.txt";
     AlignFrame af = new FileLoader().LoadFileWaitTillLoaded(inFile,
             DataSourceType.FILE);
@@ -139,7 +142,7 @@ public class JalviewChimeraView
     /*
      * Wait for viewer load thread to complete
      */
-    while (!binding.isFinishedInit())
+    do
     {
       try
       {
@@ -147,11 +150,36 @@ public class JalviewChimeraView
       } catch (InterruptedException e)
       {
       }
-    }
+    } while (!binding.isFinishedInit()  ||  !chimeraViewer.isVisible());
 
     assertTrue(binding.isViewerRunning(), "Failed to start Chimera");
 
     assertEquals(chimeraViewer.getBinding().getPdbCount(), 1);
+    assertTrue(chimeraViewer.hasViewerActionsMenu());
+
+    // now add another sequence and bind to view
+    // 
+    AlignmentI al = af.getViewport().getAlignment();
+    PDBEntry xpdb = al.getSequenceAt(0).getPDBEntry("1GAQ");
+    sq = new Sequence("1GAQ", al.getSequenceAt(0).getSequence(25, 95).toString());
+    al.addSequence(sq);
+    structureViewer.viewStructures(new PDBEntry[] { xpdb }, new SequenceI[] { sq }, af.getCurrentView().getAlignPanel());
+
+    /*
+     * Wait for viewer load thread to complete
+     */
+    do 
+    {
+      try {
+        Thread.sleep(1500);
+      } catch (InterruptedException q) {};
+    } while (!binding.isLoadingFinished());
+    
+    // still just one PDB structure shown
+    assertEquals(chimeraViewer.getBinding().getPdbCount(), 1);
+    // and the viewer action menu should still be visible
+    assertTrue(chimeraViewer.hasViewerActionsMenu());
+
     chimeraViewer.closeViewer(true);
     chimeraViewer = null;
     return;