X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fgui%2FAlignFrameTest.java;fp=test%2Fjalview%2Fgui%2FAlignFrameTest.java;h=3fe56b74610b7ef5df85df12916f3613cbd2473f;hb=6a05eb3f55d97e685f0c723822384633d5636778;hp=60a94c42bd548a315b2229a07bd5db98c4779514;hpb=d113749a183a3ea8f3f7e22c725511f59f1d833f;p=jalview.git

diff --git a/test/jalview/gui/AlignFrameTest.java b/test/jalview/gui/AlignFrameTest.java
index 60a94c4..3fe56b7 100644
--- a/test/jalview/gui/AlignFrameTest.java
+++ b/test/jalview/gui/AlignFrameTest.java
@@ -62,7 +62,53 @@ public class AlignFrameTest
   AlignFrame af;
 
   @BeforeClass(alwaysRun = true)
-  public void setUpJvOptionPane()
+  public static void setUpBeforeClass() throws Exception
+  {
+    setUpJvOptionPane();
+    /*
+     * use read-only test properties file
+     */
+    Cache.loadProperties("test/jalview/io/testProps.jvprops");
+    Jalview.main(new String[] { "-nonews" });
+  }
+
+  @AfterMethod(alwaysRun = true)
+  public void tearDown()
+  {
+    Desktop.instance.closeAll_actionPerformed(null);
+  }
+
+  /**
+   * configure (read-only) properties for test to ensure Consensus is computed for
+   * colour Above PID testing
+   */
+  @BeforeMethod(alwaysRun = true)
+  public void setUp()
+  {
+    Cache.loadProperties("test/jalview/io/testProps.jvprops");
+    Cache.applicationProperties.setProperty("SHOW_IDENTITY",
+            Boolean.TRUE.toString());
+    af = new FileLoader().LoadFileWaitTillLoaded("examples/uniref50.fa",
+            DataSourceType.FILE);
+
+    /*
+     * wait for Consensus thread to complete
+     */
+    synchronized (this)
+    {
+      while (af.getViewport().getConsensusSeq() == null)
+      {
+        try
+        {
+          wait(50);
+        } catch (InterruptedException e)
+        {
+        }
+      }
+    }
+  }
+
+  public static void setUpJvOptionPane()
   {
     JvOptionPane.setInteractiveMode(false);
     JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
@@ -183,53 +229,6 @@ public class AlignFrameTest
     assertFalse(regions.hasNext());
   }
 
-  @BeforeClass(alwaysRun = true)
-  public static void setUpBeforeClass() throws Exception
-  {
-    /*
-     * use read-only test properties file
-     */
-    Jalview.main(
-            new String[]
-            { "-nonews", "-props", "test/jalview/io/testProps.jvprops" });
-  }
-
-  @AfterMethod(alwaysRun = true)
-  public void tearDown()
-  {
-    Desktop.instance.closeAll_actionPerformed(null);
-  }
-
-  /**
-   * configure (read-only) properties for test to ensure Consensus is computed
-   * for colour Above PID testing
-   */
-  @BeforeMethod(alwaysRun = true)
-  public void setUp()
-  {
-    Cache.loadProperties("test/jalview/io/testProps.jvprops");
-    Cache.applicationProperties.setProperty("SHOW_IDENTITY",
-            Boolean.TRUE.toString());
-    af = new FileLoader().LoadFileWaitTillLoaded("examples/uniref50.fa",
-            DataSourceType.FILE);
-
-    /*
-     * wait for Consensus thread to complete
-     */
-    synchronized (this)
-    {
-      while (af.getViewport().getConsensusSeq() == null)
-      {
-        try
-        {
-          wait(50);
-        } catch (InterruptedException e)
-        {
-        }
-      }
-    }
-  }
-
   /**
    * Test that changing background (alignment) colour scheme
    * <ul>