X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FAnnotatedPDBFileInputTest.java;fp=test%2Fjalview%2Fio%2FAnnotatedPDBFileInputTest.java;h=beeb52f50587978f1beeed9a5f27d10f825f6c25;hb=b87512d6e28a2a93ea2f08dcfbee320856c5c8de;hp=8eb37968f39d1912d8b860577a125378ae46c6de;hpb=ab0e5f2223a993371761baf240d815abdfcbb950;p=jalview.git

diff --git a/test/jalview/io/AnnotatedPDBFileInputTest.java b/test/jalview/io/AnnotatedPDBFileInputTest.java
index 8eb3796..beeb52f 100644
--- a/test/jalview/io/AnnotatedPDBFileInputTest.java
+++ b/test/jalview/io/AnnotatedPDBFileInputTest.java
@@ -68,9 +68,9 @@ public class AnnotatedPDBFileInputTest
   @BeforeMethod(alwaysRun = true)
   public void setup() throws Exception
   {
-    Cache.applicationProperties.setProperty("STRUCT_FROM_PDB",
+    Cache.setPropertyNoSave("STRUCT_FROM_PDB",
             Boolean.TRUE.toString());
-    Cache.applicationProperties.setProperty("ADD_SS_ANN",
+    Cache.setPropertyNoSave("ADD_SS_ANN",
             Boolean.TRUE.toString());
     FileLoader loader = new FileLoader(false);
     AlignFrame af = loader.LoadFileWaitTillLoaded("examples/1gaq.txt",
@@ -207,7 +207,7 @@ public class AnnotatedPDBFileInputTest
   @AfterClass(alwaysRun = true)
   public static void tearDownAfterClass() throws Exception
   {
-    jalview.gui.Desktop.instance.closeAll_actionPerformed(null);
+    jalview.gui.Desktop.getInstance().closeAll_actionPerformed(null);
 
   }