X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fio%2FAnnotationFileIOTest.java;fp=test%2Fjalview%2Fio%2FAnnotationFileIOTest.java;h=62bd0b96699880862b2ed283f77f29e019c77b05;hb=49ae0c9823bb1c450e03460c5714a7db3cdf440b;hp=c3aa13e8fd4d97d7aba67c4b69e30e875e50c151;hpb=7e7c422421698d7a47a9bad846c5522556f066d6;p=jalview.git

diff --git a/test/jalview/io/AnnotationFileIOTest.java b/test/jalview/io/AnnotationFileIOTest.java
index c3aa13e..62bd0b9 100644
--- a/test/jalview/io/AnnotationFileIOTest.java
+++ b/test/jalview/io/AnnotationFileIOTest.java
@@ -153,7 +153,8 @@ public class AnnotationFileIOTest
                       DataSourceType.PASTE));
 
       // test for consistency in io
-      StockholmFileTest.testAlignmentEquivalence(al, al_new, false);
+      StockholmFileTest.testAlignmentEquivalence(al, al_new, false, false,
+              false);
       return;
     } catch (Exception e)
     {