X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fschemes%2FScoreMatrixPrinter.java;fp=test%2Fjalview%2Fschemes%2FScoreMatrixPrinter.java;h=0000000000000000000000000000000000000000;hb=e0aacff0a162fdf1beb71cd5965b6ff4f8c9de0d;hp=80241fb75e5621d2b8a9b8ac313ed40bb655632d;hpb=627a783b3535fc5ac2a2b2354ee3f61006f6c37f;p=jalview.git
diff --git a/test/jalview/schemes/ScoreMatrixPrinter.java b/test/jalview/schemes/ScoreMatrixPrinter.java
deleted file mode 100644
index 80241fb..0000000
--- a/test/jalview/schemes/ScoreMatrixPrinter.java
+++ /dev/null
@@ -1,64 +0,0 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *
- * Jalview is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- * PURPOSE. See the GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with Jalview. If not, see .
- * The Jalview Authors are detailed in the 'AUTHORS' file.
- */
-package jalview.schemes;
-
-import jalview.api.analysis.ScoreModelI;
-import jalview.gui.JvOptionPane;
-
-import java.util.Map;
-
-import org.testng.annotations.BeforeClass;
-
-public class ScoreMatrixPrinter
-{
-
- @BeforeClass(alwaysRun = true)
- public void setUpJvOptionPane()
- {
- JvOptionPane.setInteractiveMode(false);
- JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
- }
-
- public void printAllMatrices()
- {
- for (Map.Entry sm : ResidueProperties.scoreMatrices
- .entrySet())
- {
- System.out.println("Matrix " + sm.getKey());
- System.out.println(sm.getValue().toString());
- }
- }
-
- public void printHTMLMatrices()
- {
- for (Map.Entry _sm : ResidueProperties.scoreMatrices
- .entrySet())
- {
- if (_sm.getValue() instanceof ScoreMatrix)
- {
- ScoreMatrix sm = (ScoreMatrix) _sm.getValue();
- System.out.println("Matrix " + _sm.getKey());
- System.out.println(sm.outputMatrix(true));
- }
- }
- }
-
-}