X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fstructures%2Fmodels%2FAAStructureBindingModelTest.java;h=aea12b41eec768b6f328655abe61c964f40e4bfb;hb=8a43b8353b89a47002ef17c959ed61281fc4d826;hp=c1ad03a65f2dc5c1241106c94af44555d1468997;hpb=91cf2210f6440d85c8a488c1bd18b0d3feb93f19;p=jalview.git diff --git a/test/jalview/structures/models/AAStructureBindingModelTest.java b/test/jalview/structures/models/AAStructureBindingModelTest.java index c1ad03a..aea12b4 100644 --- a/test/jalview/structures/models/AAStructureBindingModelTest.java +++ b/test/jalview/structures/models/AAStructureBindingModelTest.java @@ -23,7 +23,7 @@ package jalview.structures.models; import static org.testng.Assert.assertEquals; import static org.testng.Assert.assertFalse; import static org.testng.Assert.assertNotNull; -import static org.testng.Assert.assertTrue; +import static org.testng.AssertJUnit.assertTrue; import java.awt.Color; import java.io.IOException; @@ -135,61 +135,13 @@ public class AAStructureBindingModelTest // ideally, we would match on the actual data for the 'File' handle for // pasted files, // see JAL-623 - pasting is still not correctly handled... - PDBEntry importedPDB = new PDBEntry("3A6S", "", Type.PDB, - "Paste"); - AAStructureBindingModel binder = new AAStructureBindingModel( - new StructureSelectionManager(), new PDBEntry[] + PDBEntry importedPDB = new PDBEntry("3A6S", "", Type.PDB, "Paste"); + AAStructureBindingModel binder = newBindingModel(new PDBEntry[] { importedPDB }, new SequenceI[][] - { importedAl.getSequencesArray() }, null) - { - - @Override - public void updateColours(Object source) - { - } - - @Override - public void releaseReferences(Object svl) - { - } - - @Override - public String[] getStructureFiles() - { - return null; - } - - @Override - public void highlightAtoms(List atoms) - { - } - - @Override - public SequenceRenderer getSequenceRenderer(AlignmentViewPanel alignment) - { - return null; - } + { importedAl.getSequencesArray() }, + new StructureSelectionManager(), null); - @Override - protected List executeCommand(StructureCommandI command, - boolean getReply) - { - return null; - } - - @Override - protected String getModelIdForFile(String chainId) - { - return ""; - } - - @Override - protected ViewerType getViewerType() - { - return null; - } - }; String[][] chains = binder.getChains(); assertFalse(chains == null || chains[0] == null, "No chains discovered by binding"); @@ -279,6 +231,11 @@ public class AAStructureBindingModelTest } @Override + public void setBackgroundColour(Color col) + { + } + + @Override public SequenceRenderer getSequenceRenderer( AlignmentViewPanel avp) {