X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fws%2Fjabaws%2FJpredJabaStructExportImport.java;fp=test%2Fjalview%2Fws%2Fjabaws%2FJpredJabaStructExportImport.java;h=49a306425db34a6f81195803e8d3b20e072c0e76;hb=5882e58cfd12524e14fb6d84264a3ff63a4ff29d;hp=7afaeed8da7ae95a0e093b5547d680560b9cc593;hpb=f3b9ee1c57282a1233ffec89ec5aae39dc29d25f;p=jalview.git diff --git a/test/jalview/ws/jabaws/JpredJabaStructExportImport.java b/test/jalview/ws/jabaws/JpredJabaStructExportImport.java index 7afaeed..49a3064 100644 --- a/test/jalview/ws/jabaws/JpredJabaStructExportImport.java +++ b/test/jalview/ws/jabaws/JpredJabaStructExportImport.java @@ -20,23 +20,8 @@ */ package jalview.ws.jabaws; -import static org.junit.Assert.assertNotNull; -import static org.junit.Assert.assertTrue; -import static org.junit.Assert.fail; - -import java.awt.Component; -import java.util.ArrayList; -import java.util.List; - -import javax.swing.JMenu; -import javax.swing.JMenuItem; - -import org.junit.AfterClass; -import org.junit.BeforeClass; -import org.junit.Test; - -import compbio.metadata.Argument; -import compbio.metadata.WrongParameterException; +import static org.testng.AssertJUnit.assertNotNull; +import static org.testng.AssertJUnit.assertTrue; import jalview.datamodel.AlignmentI; import jalview.gui.Jalview2XML; @@ -50,6 +35,21 @@ import jalview.ws.jws2.SequenceAnnotationWSClient; import jalview.ws.jws2.jabaws2.Jws2Instance; import jalview.ws.params.AutoCalcSetting; +import java.awt.Component; +import java.util.ArrayList; +import java.util.List; + +import javax.swing.JMenu; +import javax.swing.JMenuItem; + +import org.testng.Assert; +import org.testng.annotations.AfterClass; +import org.testng.annotations.BeforeClass; +import org.testng.annotations.Test; + +import compbio.metadata.Argument; +import compbio.metadata.WrongParameterException; + public class JpredJabaStructExportImport { public static String testseqs = "examples/uniref50.fa"; @@ -82,7 +82,7 @@ public class JpredJabaStructExportImport if (jpredws == null) { - fail("jpredws is null"); + Assert.fail("jpredws is null"); } jalview.io.FileLoader fl = new jalview.io.FileLoader(false); @@ -144,7 +144,7 @@ public class JpredJabaStructExportImport if (!success) { jpredClient.cancelCurrentJob(); - fail("Jpred Client didn't run with hardwired default parameters."); + Assert.fail("Jpred Client didn't run with hardwired default parameters."); } } catch (InterruptedException x) @@ -221,15 +221,15 @@ public class JpredJabaStructExportImport { e.printStackTrace(); } - fail("Test " + Assert.fail("Test " + testname + "\nCouldn't complete Annotation file roundtrip input/output/input test."); } - // @Test + @Test public void testJpredwsSettingsRecovery() { - fail("not implemnented"); + Assert.fail("not implemnented"); List opts = new ArrayList(); for (compbio.metadata.Argument rg : (List) jpredws .getRunnerConfig().getArguments()) @@ -241,7 +241,7 @@ public class JpredJabaStructExportImport rg.setValue("292"); } catch (WrongParameterException q) { - fail("Couldn't set the temperature parameter " + Assert.fail("Couldn't set the temperature parameter " + q.getStackTrace()); } opts.add(rg);